Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 7e-13 >seq27 Length=1394890 Score = 89.7 bits (98), Expect = 7e-13 Identities = 229/342 (67%), Gaps = 14/342 (4%) Strand=Plus/Plus Query 135408 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 135467 || ||||| || || ||||||| || ||| | |||||| ||||| | ||| || Sbjct 185397 CCTTTCACACACAGCACTTGCTGCAGTACCGCGACAACGTCCACAAGGTCGTCCTGAGCA 185456 Query 135468 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 135527 ||||||| || ||||| |||||| ||| ||| | ||||| | |||||| ||| Sbjct 185457 GCCATGACAGCACCGATGCTCTTGTAAGCCGCCGGCGTCTCGTCCAGCACGCCGCTATCC 185516 Query 135528 TTACGGCACTCCACGCCCTCGGTGGC---CTTGATCTGGTCCTCCAGGGTGAAG-GTCGC 135583 || |||||||| | |||| | || || || | ||||| | | |||||| | || Sbjct 185517 TTTCGGCACTCGATGCCCACAGTAGCAGCCTCG---TGGTCAGCGACGGTGAATCGACGG 185573 Query 135584 CTTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGA 135640 | | ||| | ||||| | | || ||| || || ||||||||||| || ||| | Sbjct 185574 CGCG-CCTCG--CCGCGGCTGTAGCG-CCGCCCAGCACCGTGCGAGCAGGAACAGTAGCT 185629 Query 135641 GTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGAT 135700 || | |||| || || ||||| |||||| |||||||| || ||||| |||| Sbjct 185630 TGCCACGCTGCCTTTACCTCGCACAATGTAGCTGCACGCCCCCATGGACCCGGGAATGAC 185689 Query 135701 CCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGT 135742 ||| || || | |||| ||| || |||||||| || Sbjct 185690 GGCGAGCTCACCCATACGCGCAGACGTAGCTCCCTTGCGAGT 185731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700440465997800