Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq21 228 2e-54 seq15 163 5e-35 >seq21 Length=1153175 Score = 228 bits (252), Expect = 2e-54 Identities = 866/1330 (65%), Gaps = 47/1330 (4%) Strand=Plus/Minus Query 212855 GCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGAC 212914 |||||| | ||||||||| || || | | ||| | |||| |||| |||||| Sbjct 326335 GCGCATCTGCTCGTTCCACAGCCCACGCGCGATGAGGTCCATGACGAGGTATTTGTTGAC 326276 Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974 | |||| || || ||||| | || |||| |||||| ||| | ||||||| Sbjct 326275 CACAGGGAACTCGCCGCTCAGCACACGCCGAACATAAATGTTTGAGGTGAAAGGCTCGAA 326216 Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 || ||||||||| || |||||||| | ||| || || |||||||| || ||||| | Sbjct 326215 GCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGCGCAACCAGTAA 326156 Query 213035 ACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCAGTCCCATCTG 213092 ||| | || ||| || ||| | || || ||| ||||||||||| | Sbjct 326155 TGAGTTGCGCATGCCGACCT-GCCTCACCTTCTCCTTGAGGCTG-GCCCAGTCCCAGCGA 326098 Query 213093 CCAGACAGGTCC-TCGTCC-TTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCA 213150 ||| | | || ||| | ||| ||||||||||||||||| | ||||| | ||| Sbjct 326097 CCA--CTGTTCGGTCGCGCGTTC---TTCCACATGTCAAACTGGAGAATGCCCTCGCTGG 326043 Query 213151 CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCT 213210 | |||||||| | | | | ||| ||||| | |||| | |||||||| |||| || Sbjct 326042 CCGGGCTGCCGTTGAAGGTCTCGTACGGGCCCTCCTCCCTCGCCAGCTCCATCGACGACT 325983 Query 213211 GCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGG 213270 | || ||| |||||||||| || || ||||| ||| | | || ||||| | | Sbjct 325982 CGACCGCCGCGAAGTAGATGGTCTCGAAGATCTCTGCGTTTAACCGCTGCGCCTCCGCTG 325923 Query 213271 ACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGA 213330 | || |||| | |||| | ||| || || || ||||| || || | ||||| Sbjct 325922 AGACAAACGGCAGCCGCATGAGGATGAAAGTGTCCGCAAGACCCTGCACACCAAGGCCGA 325863 Query 213331 TGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTC-CTCCAAGGGGTAAAAGTTGCAGTCG 213389 ||| | || | || ||| | || || | ||||| ||||| |||||| ||| Sbjct 325862 CGGGGCGGTTGCGCATGTT-GCTGCGGCGCGCCGTCTCCACAGGGTAGTAGTTGCGGTCA 325804 Query 213390 ATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTG 213449 || | | || || ||||| ||| | || || || | || || ||| ||| Sbjct 325803 ATAACCCGATTCAGATTGCGCGTGATCTGCTTTGTCACGGTGTAGAGAAGCTGGTGGTTG 325744 Query 213450 AACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACG 213509 ||| || | || | || || |||||| ||||| ||| ||||| || ||| Sbjct 325743 AACTCGCGCTTCTCGATGTCGACGAAGCGAGGCAGCGCGATAGAGGCAAGGTTACACACG 325684 Query 213510 GCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATG 213569 ||| ||||| | |||||||||| ||||||||||||| || ||| ||| Sbjct 325683 GCCGTCTCCTCCGGCGACGTGTACTCCACAATCTCGGTGCACAAATTCGAGCACTTGATC 325624 Query 213570 GTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGG 213629 || || ||||||| ||||||||||| |||| | |||||||| | ||| | || Sbjct 325623 GTACCGAGGTTCTTCTGGTTTGACTTGCTGTTGCACGCGTCCTTGTACAAGATGAACGGC 325564 Query 213630 GACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCA 213687 || ||||| | ||| ||| |||| || ||| ||| | | |||| | ||| | Sbjct 325563 CCGCCCGTCTCGATCTGCGACTCCAGGAT--GGCAAACCACACCT-CCTGCGCCTGA--A 325509 Query 213688 CCCGCCTGACAGCTCCGGGCGTA-GCCTCGTACTGTTCGTAGAGCTCGTT-GAATTCGTG 213745 | | | || || ||| | | |||||||| | |||||||| ||| | ||| || | Sbjct 325508 TCGTCTTCAC-GCCGCGGCCCTCCGCCTCGTAGCGCTCGTAGAG-TCGCTCGAACTCTTC 325451 Query 213746 GCCC---CAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCC 213802 || ||| | ||| || ||||| || | ||| ||| || |||| | ||| Sbjct 325450 ACCATAGCAGTCGCTG---AGGCCCGGGCACGTGTTGGGGTCCATCAGCGTCCACTTCCC 325394 Query 213803 GTCATCTCTG-ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCC 213861 || |||| || | || |||||||| || |||||||||||||| ||| ||||| | Sbjct 325393 CTCG-CTCTTTACACGCTTCATGAACAAATCTGGGACCCACAGCGCATAGAAGAGGTCGC 325335 Query 213862 TGGTCCTCCTCTCGTCCACT---CCAGAGTTT---TTGCGCAGATCTAGAAAGTCAAAGA 213915 | | | | | ||| || || | ||| || |||| | |||| |||||| Sbjct 325334 GAG--CGCGT-TGGTCATCTTTGCCCGTGTTGCGCTTCAGCAGC---AAAAAGCCAAAGA 325281 Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTGCCGCC---CT 213972 ||| |||||||| ||||| | ||||| ||| ||||||||| | ||||||||| || Sbjct 325280 CGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCCTTGCGCTTGCCGCCGCCCT 325221 Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032 ||||||| | ||| ||||||||| |||||| | || || |||||||| ||| Sbjct 325220 GGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATCGGCACGAGCCCGTTCGACG 325161 Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTA 214092 || |||||||| || || || || | ||| | | |||| || | || || | Sbjct 325160 TGCCATTGGTTCCGGCAATGTAGCTTCCAGCGGCGCGGATGTTGTGCACGTGCAGGCCGA 325101 Query 214093 TGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCA 214152 |||| || || |||| ||||| |||||| | ||| || || ||||||| | | Sbjct 325100 TGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATGCCGTCAA 325041 Query 214153 TGCTGTCATC 214162 ||||||| || Sbjct 325040 TGCTGTCGTC 325031 >seq15 Length=633270 Score = 163 bits (180), Expect = 5e-35 Identities = 536/819 (65%), Gaps = 17/819 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| |||| || |||||| |||| Sbjct 479005 CTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTACCCTGCAGCGAGATCATCTC 479064 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||| ||| ||| || | | | ||| || | | ||| || | | | ||| Sbjct 479065 CATAAAGTCGAATGGCTGCGTCGCGTTGTAGTGCTTCTCCTCA--CCGAGCGAGACGAGC 479122 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || ||||||| ||| |||||||||| | | ||| | ||||||||| || || Sbjct 479123 AGTCGATCCGCCACGAACTCGATGTACTGCGCCATCAACTCCGAGTTCATGCCAATCAGT 479182 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| |||| || | || ||||| ||| || | ||| || ||| | | ||| Sbjct 479183 CGCACCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCGTCCACGATGATC 479242 Query 48077 TGCTTAACGCGGGACTCT-GAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | | ||||| ||| |||| | |||| | | |||| | || | | ||| Sbjct 479243 TCCAGCACGCG---CTCGCGAGGCAGCTTGTGCCTGATGTGCGAGTTGTACAAGAGGCAC 479299 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || |||||| |||| | ||| ||||| || ||||||| ||||| || || || Sbjct 479300 GCGAAGTCCGTGTGTAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTAAACGTTAGCCCC 479359 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || || |||||||| | || ||| ||||| || ||||||||| Sbjct 479360 GGCATCAGGCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAATGAGCCCGAAAAGAAGATG 479419 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 |||||||| || || ||| || | |||| ||| | | ||| || || || |||| Sbjct 479420 CCCTCCACCGCGGCAAACCCGATCAGCCGCTC-CTGGAAG-CTCGCGCTGCTC-CCGATC 479476 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | ||||| |||||||||||||||||||| || ||||||| || || | | Sbjct 479477 CACCGTACGGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGTCTGGATCGCGTGCAGC 479536 Query 48374 AGCTTCTTGCACTCACCT-GC-GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCT 48431 ||| | || || ||| || ||| | | || || ||||| | |||| ||| Sbjct 479537 AGCCGC-AGC-TTCTCCTCGCTGTCTGTGATGTACGTGTCCAGCAGTACCGAGTACGTCT 479594 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 | ||||| | ||||| || | ||||||||||||||| || | ||||| ||||| Sbjct 479595 CCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCT 479654 Query 48492 GCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 ||| || | || | || | || ||||| ||| || || || | || | Sbjct 479655 TCACATCACTCATAAAACGCTGCGCAAGGTTCTCGACGACAATGCCGTCGCTCCCGGCGA 479714 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT 48611 |||||||||| || || || | ||| || ||||| || | || || |||| | | Sbjct 479715 AGAAGGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTCCAGTGCCACCCAGTCTT 479774 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGA 48650 | ||| ||||| ||||| | || ||||| ||||||| Sbjct 479775 TCATGTCGTTGCCGAGGTCGATCTCCTCCACCGTCCAGA 479813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527036140800