Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq21 118 1e-21 >seq21 Length=1153175 Score = 118 bits (130), Expect = 1e-21 Identities = 553/864 (64%), Gaps = 17/864 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | ||||||||||| ||||| |||| || ||||| || | || || Sbjct 324857 CCACAGCAGATGTTCATGCGTGTCGCCCTCGGGATTCACGGCCGGGATCTCGAGAACGTG 324916 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 ||||||||||| |||||| | ||| | |||| ||||| ||||| ||||||||| Sbjct 324917 CGTGAGACATACGAGCTGATGTCGAAGGGTTTCTTCACCCACGCCACACCGACCCTCTTC 324976 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || || || |||| ||||| ||| | |||||||| | || ||||| ||| Sbjct 324977 AACGCCGGCACCCCAAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGACGAC 325036 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || |||| ||||| | || || | |||||| || ||| ||| |||||| Sbjct 325037 AGCATTGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCGGCTGGC 325096 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAAT-AAATCTCGTATTCGGGGGACAAA 75510 || || || ||||| | || | | | ||| | || || ||| || || || Sbjct 325097 GGCATCGGCCTGCACGTGCACAACATCCGCGCCGCTGGAAGCT-ACATTGCCGGAACCAA 325155 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | || | | || ||||| ||||| || ||| ||| || ||||| || Sbjct 325156 TGGCACGTCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAACAACACTGCCCGCTACGT 325215 Query 75571 AAATCA-AGCGG-GGC-GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627 | || |||| ||| |||||||| || |||| |||||| | || |||||||| || Sbjct 325216 GGACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTACCTTGAGCCATGGCACGC 325275 Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAG 75687 ||| || | | || | | | | |||| || | || || || | | Sbjct 325276 CGACGTCTTTGGCTTTTTGCTGCTGAAGCGCAACACGGGCAAAGATGACCAACGCGCTCG 325335 Query 75688 AGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGG 75747 || ||||| | | |||||| | ||||| | ||||||||||| | | | ||| | || Sbjct 325336 CGACCTCTTCTATGCGCTGTGGGTCCCAGATTTGTTCATGAAGCGTG-TAAAGAGCGAGG 325394 Query 75748 TCAA-TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGAG 75805 || ||| | || | || ||| | || || ||| |||| || | ||||| Sbjct 325395 GGAAGTGGACGCTGATGGACCCCAACACGTGCCCGGGCCTCAGCGACTGCTAT-GGTGAA 325453 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCC---AATGCGACTGTA 75862 ||||| || |||||| || || | |||||| | | | || ||| | Sbjct 325454 GAGTTCGAGCGACTCTACGAGCGCTACGAGGCGGAGGGCCGCGGCGTGAAGACGATT--- 325510 Query 75863 CCAGCCGC-CGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 ||| ||| || || ||| || || || | || |||| ||||| || || | Sbjct 325511 -CAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTT 325569 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 || | |||||||| || || |||| ||| ||||| ||||| | || || ||||| Sbjct 325570 CATCTTGTACAAGGACGCGTGCAACAGCAAGTCAAACCAGAAGAACCTCGGTACGATCAA 325629 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | |||| ||| | ||||| || ||| | |||||||| ||| |||||||| || || Sbjct 325630 GTGCTCGAATTTGTGCACCGAGATTGTGGAGTACACGTCGCCGGAGGAGACGGCCGTGTG 325689 Query 76042 CAATTTGGCATCAATCGCCCTTCC 76065 || | || || ||||| || || Sbjct 325690 TAACCTTGCCTCTATCGCGCTGCC 325713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565908725600