Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq21 273 3e-68 seq19 214 2e-50 >seq21 Length=1153175 Score = 273 bits (302), Expect = 3e-68 Identities = 1019/1591 (64%), Gaps = 16/1591 (1%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 ||| || || |||||| | || || || ||||| || || || || ||||| || || || Sbjct 1057901 AGCCATCGGCATCGATCTCGGCACGACGTACTCGTGCGTAGGCGTGTGGCAGAACGAGCG 1057842 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 || ||||| ||| |||| ||||| || ||||| || || || ||||| ||||| || || Sbjct 1057841 CGTGGAGATCATCGCGAACGACCAGGGCAACCGCACGACGCCGTCGTATGTTGCGTTCAC 1057782 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 || || || || | || || ||||| || || ||| || |||||||| ||| Sbjct 1057781 GGACTCGGAGCGCCTGATCGGCGACGCCGCGAAGAACCAGGTGGCGATGAACCCGCACAA 1057722 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 || || || ||||||||||| || ||||| |||||||| || | | || || | Sbjct 1057721 CACGGTGTTCGACGCGAAGCGCCTGATTGGCCGCAAGTTCAACGACACGGTTGTGCAGGC 1057662 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG-GCTGATAAGCCTATGATTA 195596 || || ||| ||||| | | | ||| || | || | | | || ||||| ||||| Sbjct 1057661 GGACATGAAGCACTGGCCGT-TCAAGGTGATGACGAAGGGCGACGACAAGCCCGTGATTT 1057603 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656 || | | || ||| ||| ||| || | || || || || || |||||| Sbjct 1057602 CGGTGCAGTATCGCGGCGAGGCGAAGTGCTTCACGCCGGAGGAGATCAGCTCGATGGTGC 1057543 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 || | |||||||||||||| ||||| | | | |||| || ||||| | || || | Sbjct 1057542 TGCTGAAGATGAAGGAGACGGCGGAGGCATACCTGGGCAAGCAGGTGAAGAAGGCCGTGG 1057483 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 |||| || || || ||||||| || || || || |||||||| |||||||| | | | Sbjct 1057482 TGACGGTGCCAGCATACTTCAACGACTCGCAGCGCCAGGCGACGAAGGACGCCGGCACGA 1057423 Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | || || || | || | || ||||| || || || ||||| || || || || | Sbjct 1057422 TCGCTGGCCTGGAGGTGCTGCGCATCATCAACGAGCCGACGGCGGCGGCCATCGCGTACG 1057363 Query 195837 GTCTGGACAA---GAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTG 195893 | |||||||| || | | | | || || || ||||||| || || || || | Sbjct 1057362 GCCTGGACAAAGGTGACGACGGCAAGGAGCGCAACGTGCTGATCTTCGACCTTGGCGGCG 1057303 Query 195894 GTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTG 195953 | ||||| ||||| | || || | || || || || || ||||| || ||||| || Sbjct 1057302 GCACGTTCGATGTGACGCTGCTGACCATCGACGGCGGCATCTTCGAGGTGAAGGCGACGA 1057243 Query 195954 CTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA--TTTGTC 196011 || ||||| || || || ||||| || ||||| || || ||||| || || Sbjct 1057242 ACGGCGATACGCACCTTGGCGGTGAGGACTTCGACAACCGCCT----CGTCACGTTCTTC 1057187 Query 196012 --TGATGAGTTCCGTCGAAAGAATAAG---AAAGATATTTCTGGAAATCCTAGGGCTCTT 196066 ||| |||||| || ||||| ||| || || | | | | | || || Sbjct 1057186 AGTGACGAGTTCAAGCGCAAGAACAAGGGTAAGGACCTGACGTCGAGCCAGCGCGCGCTG 1057127 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACA 196126 || || || | || || || || || || || || || || || || || | || || Sbjct 1057126 CGCCGTCTGCGCACGGCGTGCGAGCGCGCGAAGCGCACGCTGTCGTCCGCGACGCAGGCA 1057067 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | | | ||||| || | | || ||| | |||||| | | || || || || || Sbjct 1057066 ACGATCGAGATCGACGCCCTATTCGACAACGTCGACTTCCAGGCCACCATCACGCGCGCG 1057007 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 || || || ||| | | || |||| | | ||| | || || || | || Sbjct 1057006 CGCTTCGAGGAGCTGTGCGGCGACCTGTTCCGCAGTACGATGCAGCCGGTGGAGCGCGTG 1056947 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || | ||||| |||||||| ||| | || | || | || || ||||| || || Sbjct 1056946 CTGCAGGACGCCAAGATGGACAAGCGCACCGTGCACGACGTGGTGCTGGTGGGCGGGTCG 1056887 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 || || ||||||||| | || | | || ||||||| ||| || | ||| Sbjct 1056886 ACGCGCATTCCGAAGGTGCAGTCCCTCGTGTCGGACTTCTTCGGCGGTAAGGAGCTGAAC 1056827 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | |||||||| || || || || || || || || || || ||||| || || Sbjct 1056826 AAGAGCATCAACCCCGACGAGGCTGTCGCGTACGGCGCCGCGGTGCAGGCGTTCATCCTG 1056767 Query 196427 TCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 | || | | | || | | | || ||||| || || || | || | | Sbjct 1056766 ACGGGCGGCAAGAGCAAGCAGACGGAGGGCCTGCTGCTGCTGGACGTGACGCCGCTGACG 1056707 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 ||||| |||| || || || || || ||||| | || | | ||||| || || Sbjct 1056706 CTGGGCATTGAGACGGCCGGCGGCGTGATGACGGCGCTCATCAAGCGCAACACGACGATC 1056647 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 ||||| |||||| || |||| || || || | || || || || || || || || Sbjct 1056646 CCGACCAAGAAGAGTCAGATCTTCTCGACCTACGCGGACAACCAGCCTGGCGTGCACATC 1056587 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGAT 196666 || || | || || || ||| || | ||||| ||| || || || || ||||| Sbjct 1056586 CAGGTCTTCGAGGGCGAGCGCGCCATGACGAAGGACTGCCACCTGCTGGGCACGTTCGAC 1056527 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 || | || || ||| | || || | || || || |||||| | || |||||| | Sbjct 1056526 CTGTCCGGCATCCCACCGGCGCCGCGCGGCGTGCCGCAGATTGAGGTGACCTTCGACCTG 1056467 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786 ||||| || || || || |||||| | || || || |||| | ||||| | || Sbjct 1056466 GACGCGAACGGCATCCTGAACGTCTCCGCAGAAGAGAAGGGCACCGGCAAGCGCAACCAG 1056407 Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAA 196846 || || ||||| |||||||| ||||| ||||| || || || || ||||| | Sbjct 1056406 ATCACCATCACCAACGACAAGGGCCGGCTGAGCAAGGACGAGATCGAGCGCATGGTGAAC 1056347 Query 196847 GATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 || |||| |||||| || || ||| ||| Sbjct 1056346 GACGCGGCCAAGTACGAGGCAGCCGACAAGG 1056316 Score = 113 bits (124), Expect = 6e-20 Identities = 221/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||| | || | ||| | || | | || || | || || ||||| Sbjct 458121 AAGATGAAGGAGATCTCCGAGACGTTCCTCGGCGAGAAGGTAAAGAACGCCGTCGTGACG 458180 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| |||| | || || ||||| || |||||||||| | || || Sbjct 458181 GTTCCCGCGTACTTCAATGATGCGCAGCGCCAGGCAACGAAGGACGCTGGTAAGATCGCC 458240 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| | | | || ||||| || || || ||||| || || || || || || Sbjct 458241 GGCCTTAACGTTGTCCGCATCATCAACGAGCCGACCGCGGCCGCCATCGCCTACGGGCT- 458299 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||||| | || || || || | | |||| |||||||| ||||| ||||| Sbjct 458300 -----CAACAAAGCCGGGGAGAAGAACATCCTCGTCTTCGATCTCGGCGGTGGCACGTTC 458354 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || || |||| |||||| | || | || || || || || || ||| Sbjct 458355 GATGTGTCCCTGCTCACTATTGACGAGGGCTTCTTTGAGGTGGTCGCGACGAACGGCGAT 458414 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || || || |||||||| |||||| Sbjct 458415 ACCCACCTTGGCGGTGAAGACTTCGAT 458441 >seq19 Length=1032596 Score = 214 bits (236), Expect = 2e-50 Identities = 465/693 (67%), Gaps = 6/693 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 |||||||| || || | || || || ||||| || || ||||| | | || || | Sbjct 395501 GCTATTGGCATTGACCTTGGCACGACGTACTCTTGCGTCGGTGTCTTCAAGAACGACCAG 395560 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| |||| ||||| || ||||| || || || || || || ||||| || Sbjct 395561 GTGGAGATCATCGCGAACGACCAGGGCAACCGCACGACGCCGTCCTATGTGGCCTTCACC 395620 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || | || || ||||| || || ||| || |||||||| ||| Sbjct 395621 GAGACGGAGCGCCTGATCGGCGACGCCGCGAAGAACCAGGTGGCGATGAACCCGCACAAC 395680 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| | || || ||||||| ||| | | | || Sbjct 395681 ACGGTGTTCGACGCGAAGCGCATGATCGGCCGCAAGTACGACGATCCGGACCTGCAGTCG 395740 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | ||| || ||| || | ||||| | ||||| Sbjct 395741 GACATGAAGCACTGGCCCT-TCAAGGTGA--CCGTCAAGGACGGCAAGCCGGTCATTAAC 395797 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || || | ||| || || || |||| ||| ||||| || || |||||||| || Sbjct 395798 GTCGAGTATCAGAGTCAGTCCAAGACATTTTTTCCTGAAGAGATCTCCGCTATGGTGCTG 395857 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 | |||||||||||||| || || | | | | || | || || || |||| || | Sbjct 395858 CTGAAGATGAAGGAGACGGCCGAGGCGTACCTCGGCACTACCGTCAAGAATGCCGTCATC 395917 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || ||||||| || || || |||||||| || |||||||| | | || Sbjct 395918 ACTGTTCCGGCATACTTCAACGACTCGCAGCGACAGGCAACGAAGGACGCCGGCTCCATC 395977 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| || || || || || || || || || || Sbjct 395978 GCTGGCCTTAACGTGCTGCGCATCATCAACGAGCCGACCGCCGCCGCGATCGCGTACGGC 396037 Query 195839 CTGGAC---AAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 ||||| ||| | | | ||| ||||| || ||||||| || || ||||| ||| Sbjct 396038 ATGGACCGAAAGGCAGATAAGGGAGAGAAAAACGTGCTGATCTTCGACCTTGGTGGCGGT 396097 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 ||||| ||||| | || || | || || || |||| || || ||||| || || Sbjct 396098 ACGTTCGATGTGACGCTGCTGACCATCGAGTCCGGCGTATTTGAGGTGAAGGCAACAGCG 396157 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| ||||| || || || || || |||||| Sbjct 396158 GGTGACACTCACCTCGGCGGCGAGGACTTCGAT 396190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858329476400