Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq21 150 5e-31 >seq21 Length=1153175 Score = 150 bits (166), Expect = 5e-31 Identities = 620/968 (64%), Gaps = 30/968 (3%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 ||||| || || ||||| || || ||||||| | || || |||| || |||||||| Sbjct 325704 ATAGAGGCAAGGTTACACACGGCCGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 325646 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||||| || || | |||||| || || | ||||||||||| || || ||||| || || Sbjct 325645 GCACAAATTCGAGCACTTGATCGTACCGAGGTTCTTCTGGTTTGACTTGCTGTTGCACGC 325586 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCA 155767 |||||||| | ||| | || || ||||| ||||| | ||||| || | ||| Sbjct 325585 GTCCTTGTACAAGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCA 325526 Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAG 155827 | || | || | ||| ||| | | ||| |||| ||| || | || || Sbjct 325525 CACCTCCTGCGCCTGAATCGTCTTCACGCCGCGGCCCTCCGCCTCGTAGCGCTCGTAGAG 325466 Query 155828 -CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 || || | | || ||||| || || || || || || |||||| | | |||| | || Sbjct 325465 TCGCTC-GAACTCTTCACCATAGCAGTCGCTGAGGCCCGGGCACGTGTTGGGGTCCATCA 325407 Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 ||| ||| | | | ||||||||| ||| || | ||| |||| | |||| Sbjct 325406 GCGTCCACTTCCCCTCGCTCTTTACACGCTTCATGAACAAATCTGGGACCCACAGCGCAT 325347 Query 155947 AGAAAAGGTCCCTTGC-CTTTGACTCCTCATCG-CCGTGAT--TCTTCCGTAGCTCTAAG 156002 |||| ||||| | || | ||| || || | | ||||| | |||| | ||| || Sbjct 325346 AGAAGAGGTCGCGAGCGCGTTG-GTCATCTTTGCCCGTGTTGCGCTTCAGCAGC---AAA 325291 Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT- 156061 || | | || | || |||||| || || | || || || || | ||| Sbjct 325290 AAGCCAAAGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCCTTGCGCTTG 325231 Query 156062 --GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 ||| ||||| || || || || ||||| || |||||||| | ||||| || | | Sbjct 325230 CCGCCGCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATCGGCACGAGC 325171 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || || || ||||||||||||||| ||| | |||| | ||| | || || | Sbjct 325170 CCGTTCGACGTGCCATTGGTTCCGGCAATGTAGCTTCCAGCGGCGCGGATGTTGTGCACG 325111 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || || || || || || | | || || ||||| ||||| | || | | | Sbjct 325110 TGCAGGCCGATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAG 325051 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 || || ||||| || || | | | | || ||||||| || | ||| || | Sbjct 325050 ATGCCGTCAATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTTT 324991 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 || || || |||||||| || || ||||| || || | || | || ||||| Sbjct 324990 GGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGAAGAAACCCTTCGACATCAGC 324931 Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419 ||||||||||| | ||||| |||| |||||||| | || | ||| | ||| Sbjct 324930 TCGTATGTCTCACGCACGTTCTCGAGATCCCGGCCGTGAATCCCGAGGGCGACACGCATG 324871 Query 156420 CACATATGCTGAGGACGCTCTACAA--------TCACTCC-------ATCAATTCGCAGA 156464 |||| ||||| ||||||||||||| |||| || || || |||||| Sbjct 324870 AACATCTGCTGTGGACGCTCTACAATTCGCATCTCACCCCTGCCGGTGTCGATGCGCAGA 324811 Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAA 156524 || || | ||| ||||| || || ||||||| | ||||| ||||| ||| ||| Sbjct 324810 AGATACGAGCGCTCCAGCGTCTTGTACCCGAAGAACTCAAAGTTCAAATCGCGGGAGTAG 324751 Query 156525 TCAATCAT 156532 |||||||| Sbjct 324750 TCAATCAT 324743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808265456815