Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq21 192 7e-43 seq15 138 1e-26 >seq21 Length=1153175 Score = 192 bits (212), Expect = 7e-43 Identities = 210/279 (75%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||| |||||||| || |||| ||| |||||||| ||||| |||||||| ||||| Sbjct 325225 GCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATCGGCACGAGCCCGTT 325166 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| ||| ||||| || || | |||| || |||||||| | |||||| || | Sbjct 325165 CGACGTGCCATTGGTTCCGGCAATGTAGCTTCCAGCGGCGCGGATGTTGTGCACGTGCAG 325106 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 |||||||||||| |||| |||| ||| | ||||||| || ||||||||||||||||| Sbjct 325105 GCCGATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATGCC 325046 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 || || |||| ||||| |||| || |||||||| ||||||| | | || Sbjct 325045 GTCAATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTTTGGGGT 324986 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAA 1630340 ||||||||||||||| || || || || |||||| || Sbjct 324985 GCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGAAGAA 324947 Score = 86.0 bits (94), Expect = 8e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1628466 CCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAG 1628525 |||||| || || ||||||||||| || || | || || ||||| ||| || || Sbjct 325357 CCACAGCGCATAGAAGAGGTCGCGAGCGCGTTGGTCATCTTTGCCCGTGTTGCGCTTCAG 325298 Query 1628526 GTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 1628585 | || | | | |||||||||||| ||||| |||||| ||| ||||||||||| Sbjct 325297 CAGCAAAAAGCCAAAGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCCTT 325238 Query 1628586 GCGCTTGCCGCCGCC 1628600 ||||||||||||||| Sbjct 325237 GCGCTTGCCGCCGCC 325223 >seq15 Length=633270 Score = 138 bits (152), Expect = 1e-26 Identities = 177/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||||||||| | |||||| ||||| ||||| |||| ||||||||| Sbjct 479000 GCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTACCCTGCAGCGAGATC 479059 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | |||||| | ||| || | | || ||||||||||| || |||||||| || Sbjct 479060 ATCTCCATAAAGTCGAATGGCTGCGTCGCGTTGTAGTGCTTCTCCTCACCGAGCGAGACG 479119 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| || || || || |||||||||||||| ||| | | | ||||||||| || Sbjct 479120 AGCAGTCGATCCGCCACGAACTCGATGTACTGCGCCATCAACTCCGAGTTCATGCCAATC 479179 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || ||||||||||| |||| | ||||| |||||| | || || || |||||| Sbjct 479180 AGTCGCACCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCGTCCACGATG 479239 Query 868931 ATCT 868934 |||| Sbjct 479240 ATCT 479243 Score = 138 bits (152), Expect = 1e-26 Identities = 202/286 (71%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || | |||||| ||||| || || | | |||||| ||| | Sbjct 479595 CCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCTGGCACCT 479654 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 || || |||| || || || ||||||||| | || ||||||||||| |||||| Sbjct 479655 TCACATCACTCATAAAACGCTGCGCAAGGTTCTCGACGACAATGCCGTCGCTCCCGGCGA 479714 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||| ||||| ||||| || | |||||||| Sbjct 479715 AGAAGGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTCCAGTGCCACCCAGTCTT 479774 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 ||||| || |||||| | |||||| | |||||||| || || || |||| Sbjct 479775 TCATGTCGTTGCCGAGGTCGATCTCCTCCACCGTCCAGATGCAGCTTTCCTGCTCCTTGT 479834 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916 || | ||| | | || || | || ||||||||||| |||| Sbjct 479835 ACTTGCGCCAGATGTCATGATACTGAATGGGGAAGAGGACGTAGCG 479880 Score = 120 bits (132), Expect = 4e-21 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | ||||||||||| | || || ||||| |||||||||||| Sbjct 479318 CCCTCGTCGCGCGAGATGAGCTCGTTGCTAAACGTTAGCCCCGGCATCAGGCCGCGCTTC 479377 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| || | |||||||| |||||| || ||||||||||| || |||||||| Sbjct 479378 TTCAGCCAGAACAGCGCGCAGAATGAGCCCGAAAAGAAGATGCCCTCCACCGCGGCAAAC 479437 Query 869300 CCGATGAGCCGCTC 869313 ||||| |||||||| Sbjct 479438 CCGATCAGCCGCTC 479451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107098577981915