Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq21 116 3e-21 seq30 104 2e-17 >seq21 Length=1153175 Score = 116 bits (128), Expect = 3e-21 Identities = 554/860 (64%), Gaps = 33/860 (4%) Strand=Plus/Minus Query 139081 ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGG-GTCGCTGTATTCGACAATTTCGGC 139139 || ||||| | ||| ||||| ||| || || || | || |||| || ||||| |||| Sbjct 325704 ATAGAGGCAAGGTTACACACGGCCGTCTCCTCCGGCGACG-TGTACTCCACAATCTCGGT 325646 Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199 |||||||| |||||||||||||| | || | || || || | ||| || || Sbjct 325645 GCACAAATTCGAGCACTTGATCGTACCGAGGTTCTTCTGGTTTGACTTGCTGTTGCACGC 325586 Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAA 139259 || ||||| | || |||| ||| || || | || | ||| | ||| | Sbjct 325585 GTCCTTGTACAAGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCA 325526 Query 139260 CAAGTCCCTAGCTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGT 139315 || ||| || || || || |||| || || ||| |||||| |||| Sbjct 325525 CACCTCCTGCGCCTGAATCGTCTTCACGC-CGCGGCCCTC--CGC-CTCGTAGCGCTCGT 325470 Query 139316 AGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACA 139375 ||||| ||||| |||||| ||| ||| || | | ||| ||| || || Sbjct 325469 AGAGTCGCTCGAACTCTTCACCATAGCAGTCGCTGAGGCCCGGGCACGTGTTGGGGTCCA 325410 Query 139376 TGAGCGACCA-TACGCCGTTCGC-CTTGACGCGCCTCATGAACAGATCCGGAATCCACAA 139433 | |||| ||| | | || |||| ||| || ||| ||||||||| ||| || | ||||| Sbjct 325409 TCAGCGTCCACTTCCCC--TCGCTCTTTACACGCTTCATGAACAAATCTGGGACCCACA- 325353 Query 139434 AGCGAACAGCAAA--TCGCG--CGCCTTCTT-ATCTTCCGAACCCATGTTACGTTTCATG 139488 ||| | || | | ||||| ||| || | ||||| ||| |||| || |||| Sbjct 325352 -GCGCATAGAAGAGGTCGCGAGCGCGTTGGTCATCTTTG---CCCGTGTTGCGCTTCAGC 325297 Query 139489 TTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTC 139548 | || |||| ||||| ||||||||||| || || |||| ||| | ||||| || Sbjct 325296 AGCAAAAAGCCAAAGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCCTTG 325237 Query 139549 CGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGC 139605 || || ||| || || || |||| || ||| || ||||| ||||||| ||||||| Sbjct 325236 CGCTTGCCGCCGCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATCGGC 325177 Query 139606 TCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG-GGACTGTTGCGAGCTCGGACG 139662 | || ||| ||| || || ||||| | ||| ||| | | ||| || |||| | Sbjct 325176 ACGAGCCCGTTCGACGTGCCATTGGT--TCCGGCAATGTAGCTTCCAGCG-GCGCGGATG 325120 Query 139663 TCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAAT 139722 | || || | | |||||| ||||| | ||| || | |||| || | Sbjct 325119 TTGTGCACGTGCAGGCCGATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAGC 325060 Query 139723 GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGT 139782 || ||||| || || ||||||||||||| | || ||||| ||||| || | | Sbjct 325059 GTGTCGTAGATGCCGTCAATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCTCATT 325000 Query 139783 TGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTC 139842 ||||| | |||||||| || || || || | ||||| ||||| | ||| Sbjct 324999 TGCGGCTTTGGGGTGCCGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGAAGAAACCCTTC 324940 Query 139843 GACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAG 139902 ||||||| ||||| || || || || | | ||||| ||||| || |||| | | Sbjct 324939 GACATCAGCTCGTATGTCTCACGCACGTTCTCGAGATCCCGGCCGTGAATCCCGAGGGCG 324880 Query 139903 ACTCGCATCAGCATATGTTG 139922 || ||||| | ||| || || Sbjct 324879 ACACGCATGAACATCTGCTG 324860 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 138493 AGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTG 138552 || ||| |||| | || | || || ||| || || || ||||| |||||||| | Sbjct 326289 AGGTATTTGTTGACCACAGGGAACTCGCCGCTCAGCACACGCCGAACATAAATGTTTGAG 326230 Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612 ||||||||||| || | |||||||| || |||||||| | |||| |||||| |||||| Sbjct 326229 GTGAAAGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATG 326170 Query 138613 TACGCCACCA 138622 ||| |||| Sbjct 326169 GGCGCAACCA 326160 >seq30 Length=2596710 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || | | | Sbjct 1328930 ATGCAGATCTTCGTGAAGACGCTCACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 1328871 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 1328870 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 1328811 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 1328810 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1328751 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| ||||| |||| ||||||| || Sbjct 1328750 ATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 1328704 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || | | | Sbjct 1329344 ATGCAGATCTTCGTGAAGACGCTCACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 1329285 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 1329284 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 1329225 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 1329224 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 1329165 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 || || ||||| || || || ||| ||||| |||| |||| Sbjct 1329164 ATCCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCG 1329124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894816258600