Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq21 170 3e-36 seq15 129 9e-24 >seq21 Length=1153175 Score = 170 bits (188), Expect = 3e-36 Identities = 198/267 (74%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||| || ||||| || |||| ||| |||||||| ||||| ||||| || ||||| Sbjct 325225 GCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATCGGCACGAGCCCGTT 325166 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 ||| ||| ||||| || || | |||| || | |||||| | |||||| || | Sbjct 325165 CGACGTGCCATTGGTTCCGGCAATGTAGCTTCCAGCGGCGCGGATGTTGTGCACGTGCAG 325106 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 |||||||||||| ||||||||| ||| | ||||||| |||||||| ||||||||||| Sbjct 325105 GCCGATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATGCC 325046 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 || || |||| ||||| ||| ||| |||||||| ||||||| | || Sbjct 325045 GTCAATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTTTGGGGT 324986 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGC 2073803 |||||| |||||||| || || || || Sbjct 324985 GCCGGCGTTGAAGAGGGTCGGTGTGGC 324959 Score = 89.7 bits (98), Expect = 8e-12 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 2069564 TCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACCACGGTAAAGTCGC 2069623 ||||||| || ||||| || | | | ||| |||| ||||||||| | || |||| Sbjct 326321 TCCACAGCCCACGCGCGATGAGGTCCATGACGAGGTATTTGTTGACCACAGGGAACTCGC 326262 Query 2069624 CCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGC 2069683 | ||||| || || || ||||| |||| |||| | |||| |||||| Sbjct 326261 CGCTCAGCACACGCCGAACATAAATGTTTGAGGTGAAAGGCTCGAAGCACTCGTTGTTGC 326202 Query 2069684 CCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGC 2069743 | || |||||||| || | || || |||||| |||| || || | |||||||||| || Sbjct 326201 CGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGCGCAACCAGTAATGAGTTGCGCATGC 326142 Query 2069744 CGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGGCCGCT 2069792 || ||| | |||| | || ||| | ||||||||||||| || || Sbjct 326141 CGACCTGCCTCACCTTCTCCTTGAGGCTGGCCCAGTCCCAGCGACCACT 326093 Score = 86.0 bits (94), Expect = 1e-10 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 |||||| | || ||||| ||||| || || | || || ||||| ||| ||||| Sbjct 325357 CCACAGCGCATAGAAGAGGTCGCGAGCGCGTTGGTCATCTTTGCCCGTGTTGCGCTTCAG 325298 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 2071997 | || | | || |||||||||||| ||||| |||||| ||| ||||||||||| Sbjct 325297 CAGCAAAAAGCCAAAGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCCTT 325238 Query 2071998 GCGCTTGCCGCCGCC 2072012 ||||||||||||||| Sbjct 325237 GCGCTTGCCGCCGCC 325223 >seq15 Length=633270 Score = 129 bits (142), Expect = 9e-24 Identities = 222/323 (69%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | ||||||||||| || || ||||| |||||||||||| Sbjct 479318 CCCTCGTCGCGCGAGATGAGCTCGTTGCTAAACGTTAGCCCCGGCATCAGGCCGCGCTTC 479377 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| |||||| || ||||||||||| || |||||||| Sbjct 479378 TTCAGCCAGAACAGCGCGCAGAATGAGCCCGAAAAGAAGATGCCCTCCACCGCGGCAAAC 479437 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| |||||||| || | | || | | ||||||| | |||||| Sbjct 479438 CCGATCAGCCGCTCCTGGAAGCTCGCGCTGCTCCC------GATCCACCGTACGGCCCAC 479491 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 |||||||| ||| | | | || | ||| | ||| ||| | | || | |||||| Sbjct 479492 TCTGCCTTCTTCTTGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 479551 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | ||| ||| ||| ||||| | || | |||||| ||||| ||||||||||| || Sbjct 479552 TCGCTGTCTGTGATGTACGTGTCCAGCAGTACCGAGTACGTCTCCGAGTGGATGTTCTCC 479611 Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663 || | |||||| || || || Sbjct 479612 ATCATCAGCTGGAACCCGTAGAA 479634 Score = 127 bits (140), Expect = 3e-23 Identities = 193/274 (70%), Gaps = 3/274 (1%) Strand=Plus/Plus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | |||||| ||| | ||||| ||||| ||||||||||| | |||| Sbjct 478973 GACGTGCCCTCCGTGCTCA---TCACGCCGGCCTTCTGGTACTCGCCCACCTTCTTCTCG 479029 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| ||||| |||| |||||||||| |||||| | ||| || | | || Sbjct 479030 AAGAAGTTCGTCTTACCCTGCAGCGAGATCATCTCCATAAAGTCGAATGGCTGCGTCGCG 479089 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 |||||||||||| |||||||| | ||||| || || || ||||| || |||||| Sbjct 479090 TTGTAGTGCTTCTCCTCACCGAGCGAGACGAGCAGTCGATCCGCCACGAACTCGATGTAC 479149 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAAC 794108 || ||| | | | ||||||||| || || ||| ||||||| |||| || ||| Sbjct 479150 TGCGCCATCAACTCCGAGTTCATGCCAATCAGTCGCACCGGCAGCGCGTCGCAGATGAAC 479209 Query 794109 TCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142 || |||||| | || || || | |||||||| Sbjct 479210 TCGCGCTCGATGTTCACCGCGTCCACGATGATCT 479243 Score = 120 bits (132), Expect = 5e-21 Identities = 186/266 (70%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||| || || || |||||||| | || |||||| Sbjct 479642 GCCTCTGGCACCTTCACATCACTCATAAAACGCTGCGCAAGGTTCTCGACGACAATGCCG 479701 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||||| ||||||| ||||| || ||||||||||| ||||| ||||| ||||| || Sbjct 479702 TCGCTCCCGGCGAAGAAGGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTCCAGT 479761 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 | ||||||| | ||||| ||||||||||| |||||| | ||||| | | || Sbjct 479762 GCCACCCAGTCTTTCATGTCGTTGCCGAGGTCGATCTCCTCCACCGTCCAGATGCAGCTT 479821 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || || || | |||||||| || || ||||| Sbjct 479822 TCCTGCTCCTTGTACTTGCGCCAGATGTCATGATACTGAATGGGGAAGAGGACGTAGCGA 479881 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTC 796415 |||||||| | |||||||||| Sbjct 479882 AACGGGTTCTCTCTCTGCAGCGGCTC 479907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916193744592305