Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq33 188 8e-43 >seq33 Length=501070 Score = 188 bits (208), Expect = 8e-43 Identities = 404/593 (68%), Gaps = 18/593 (3%) Strand=Plus/Minus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 |||| || ||||||||| ||||||| || ||||| || ||||||||||||| || || Sbjct 366047 AGGGCATCGACGTGGTTGCGGTAGACATGGGCGTCGCCGAGGGTGTGCACAAGCTCACCA 365988 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039 ||| ||||| ||| | | || | | | |||||| |||| |||| ||| |||||| Sbjct 365987 GGCCGCAGGCCCGTCGCCTTTGCAATAAGGATGGTGAGTAGCGCGTAGGAGGCGATGTTG 365928 Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC--- 147096 |||||||| || || ||||| || | ||| | |||||||| | ||| || |||||| Sbjct 365927 AAGGGGACGCCGAGACCCATATCGCACGAGCGCTGGTACACCATGCAGGACAGCTCCTTT 365868 Query 147097 CCGTC---GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGG 147152 |||| | |||||| ||||| ||| || | ||| ||||| ||||||||||| | Sbjct 365867 GCGTCCGTGTTCACGTAGAACTGAGCA-AGCAAGTGACACGGTGGCAGCGCCATCTTGCT 365809 Query 147153 CAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAA 147211 ||| | ||||||||||| | || | || || | | || | |||| | ||| | Sbjct 365808 CAGAGCGCACGGGTTCCAGGCAGTGAAGAGGAGGCGGC-GATCGTTCGGGTCCGACTTGA 365750 Query 147212 ---TCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGC 147268 |||| |||| | | | | ||||||||| |||| ||| ||| | | | || Sbjct 365749 TGGTCTCCACGATGGC---CTTGATCTGGTCCACCCCCTCGCCATTGTAATCCGCCTCGA 365693 Query 147269 AGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGC 147328 || | |||| |||||| ||||| | ||||||||||||||| || || || || || Sbjct 365692 AGCCTTTGTACTCGGCCCCGAAGTGACGCCACTGGAAGCCGTAGACAGGACCGAGATCCA 365633 Query 147329 CGGGCTTTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCC 147387 ||| | | | ||||| || | | | ||||||||| | || |||| | ||||| Sbjct 365632 TCTCCTTATTCTCTGTCAAGCCGCGGCTG-TCCAGAAACTCGCGCGAGCCGTTGCCGTCC 365574 Query 147388 CAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAG 147447 || || || ||||| | | ||| || | || ||| || || | |||||| Sbjct 365573 CAAATATGGACGCCCTTATCCGCCAGCAGCTGCGCGTTCGTTTCACCGCGCAGGAACCAC 365514 Query 147448 AGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 |||||||| || | || || | |||||| || | ||| || ||||| || || Sbjct 365513 AGCAGCTCTTCGCAGACACCGCGCCAAAATACGCGCTTTGTCGTCAGTAGCGG 365461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484389668000