Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq15 266 5e-65 seq21 178 2e-38 seq25 105 1e-16 >seq15 Length=633270 Score = 266 bits (294), Expect = 5e-65 Identities = 420/595 (71%), Gaps = 9/595 (2%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||||| | | || |||||| |||| ||||| |||||||| | || || Sbjct 479907 GAGCCGCTGCAGAGAGAGAACCCGTTTCGCTACGTCCTCTTCCCCATTCAGTATCATGAC 479848 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||| | |||| || || || || | | ||||| | |||||| ||||||| Sbjct 479847 ATCTGGCGCAAGTAC-AAGGAGCAGGAAAGCTGCATCTGGACGGTGGAGGAGATCGACCT 479789 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 |||| ||||| | |||||||| | ||| ||||| ||||| || ||||||||||| Sbjct 479788 CGGCAACGACATGAAAGACTGGGTGGCACTGGACGACGGGGAGCGGCACTTCATCAAGCA 479729 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 ||| || ||||| || ||||| ||||| ||||| || | ||||||||| || || | Sbjct 479728 CGTGCTTGCCTTCTT-CGCCGGGAGCGACGGCATTGTCGTCGAGAACCTTGCGCAGCGTT 479670 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 |||||| || || | |||||||||| || ||| |||||||||||| | || | Sbjct 479669 TTATGAGTGATGTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGG 479610 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075 | ||||||||||| || || |||||| | ||| | ||||| ||| ||| ||| | | Sbjct 479609 AGAACATCCACTCGGAGACGTACTCGGTACTGCTGGACACGTACATCACAGACAGCGAGG 479550 Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 ||||| | || | | ||| ||| | ||| | |||| | | ||| ||||| || | Sbjct 479549 AGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCGTGCATCAAGAAGAAGGCAGAGT 479490 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTT 1456195 |||| | ||||||| |||| | ||| ||| |||||||| |||| || Sbjct 479489 GGGCCGTACGGTGGATC----GGGAGCAGCGCGA-GCTTCCAGGAGCGGCTGATCGGGTT 479435 Query 1456196 TGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAA 1456254 |||||| || ||||||||||| || |||||| |||||||| | || ||||| ||||| Sbjct 479434 TGCCGCGGTGGAGGGCATCTTCTTTTCGGGCTCATTCTGCGCGCTGTTCTGGCTGAAGAA 479375 Query 1456255 GCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||||||| ||||| || || | ||||||||||| | ||| |||||||| Sbjct 479374 GCGCGGCCTGATGCCGGGGCTAACG-TTTAGCAACGAGCTCATCTCGCGCGACGA 479321 Score = 118 bits (130), Expect = 2e-20 Identities = 181/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||||||||| || || || | |||||| ||||| || |||| ||||||||||| Sbjct 479243 AGATCATCGTGGACGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGTGC 479184 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 || || ||||||||| | | | ||| |||||||| || || || || || || Sbjct 479183 GACTGATTGGCATGAACTCGGA-GTTGATGGCGCAGTACATCGAGTTC-GTGGCGGATCG 479126 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 ||||||| ||||||| || ||||||||||||| || | | || ||| | | Sbjct 479125 ACTGCTCGTCTCGCTCGG-TGAGGAGAAGCACTACAACGCGACGCAGCCATTCGACTTTA 479067 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG-CGCCGCGTGGCGAGTACG 1456759 ||||| |||||||||| |||| ||||| ||||| |||||| | | ||||||||| Sbjct 479066 TGGAGATGATCTCGCTGCAGGGTAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTACC 479007 Query 1456760 CCAAGGCCGGCGT 1456772 ||||||||||| Sbjct 479006 AGAAGGCCGGCGT 478994 >seq21 Length=1153175 Score = 178 bits (196), Expect = 2e-38 Identities = 234/322 (73%), Gaps = 2/322 (1%) Strand=Plus/Plus Query 259865 CTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACG 259924 || ||| |||||| | || |||||| |||||| || || |||||| || || Sbjct 324905 CTCGAGAACGTGCGTGAGACATACGAGCTGATGTCGAAGGGTTTCTTCACCCACGCCACA 324964 Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCG-TCGTGCTTTCTGTTGGA 259983 || || ||||| || |||||||| || ||||| ||| | |||||||| ||| ||| Sbjct 324965 CCGACCCTCTTCAACGCCGGCACCCCAAAGCCGCA-AATGAGCTCGTGCTTCCTGGTGGC 325023 Query 259984 CATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTC 260043 ||||| ||| || || |||||||| |||||||| ||| ||||||| | ||| Sbjct 325024 GTCGAAGGACGACAGCATTGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAG 325083 Query 260044 CAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGT 260103 ||||||||| ||||||||||| | || ||||| | |||||||| || |||| | Sbjct 325084 CAAGGCGGCTGGCGGCATCGGCCTGCACGTGCACAACATCCGCGCCGCTGGAAGCTACAT 325143 Query 260104 GGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACAC 260163 || || ||||| ||| ||| ||||| || ||||| ||||| ||||| || ||| |||| Sbjct 325144 TGCCGGAACCAATGGCACGTCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAACAACAC 325203 Query 260164 GGCGCGCTACGTCGACCAGTGC 260185 || |||||||| |||||| || Sbjct 325204 TGCCCGCTACGTGGACCAGGGC 325225 >seq25 Length=437616 Score = 105 bits (116), Expect = 1e-16 Identities = 308/463 (67%), Gaps = 11/463 (2%) Strand=Plus/Plus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 ||||||||| |||| || | |||||| | ||| ||| ||||| |||||| Sbjct 22665 CTCCATCTCGCCAAACCGTAGCCCGCCCTCGTGCGCGCGCCCCTCCGTCGGCTGGCGCAC 22724 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 ||| ||| | || ||||| || |||||||| ||||||||| || || ||| ||| Sbjct 22725 TAGCGGCTGCAACGGCCCGCGCGGGCGGGCGTGGATCTTGTCGCCGGACAGGTGCTTCAG 22784 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTAAA-GATCAACGCCTCCATGGGCTCGCCGGTGTGCG 1600436 ||||||| | | || |||| ||| ||| | |||| ||| | |||||| Sbjct 22785 CCTCTGGTAGAA-AGTGGGGCCGAAAAAGATGAGGTGATCCAGCGGCAGCGCAGTGTGCC 22843 Query 1600437 GGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGT--GGCGAGCCAACTCGGCGGC 1600494 || |||||| ||| |||||||| |||| || | || |||| || | | | | Sbjct 22844 CGTTGTAGAGGCACTCGTTGCCGTACCGCT-GCGACTGTAGGGCGTGC-AGGGCCTTGCC 22901 Query 1600495 GACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCGGCA 1600554 || ||||| ||| |||| || || ||||| ||| || | ||||| | ||| Sbjct 22902 GAAGTCGTCCACGACGACGGAGCAGAACGGCGTCGCGTACACCTCGCCGCCCTTGTAGCA 22961 Query 1600555 GGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGC 1600614 ||||||||||| || | || |||| | | ||| |||||||| || || ||||| Sbjct 22962 CGCCACCTTGCCGGCCAGTGTTTCGATCAGGTGGGCCACCGTCATGCGGGAGGGAATGGC 23021 Query 1600615 GTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTC 1600674 ||| |||||||| | | ||| || | | ||| |||| | || ||||||||||||| Sbjct 23022 GTGAGGGTTGATGATGAGGTCCGGTACGACGCCGTCGCG-GTTGA--AGGGCATGTCCTC 23078 Query 1600675 GGTGGAG-CGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCG 1600716 ||| | | | |||| ||||||||| || ||||| || Sbjct 23079 -TTGGCGAAACTGGATGCCGTTGGTGCCCTTCTGCCCGTGTCG 23120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177763456340190