Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq21 131 2e-25 >seq21 Length=1153175 Score = 131 bits (144), Expect = 2e-25 Identities = 557/864 (64%), Gaps = 17/864 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | ||||||||||| || ||| |||| ||||| || || | || || Sbjct 324857 CCACAGCAGATGTTCATGCGTGTCGCCCTCGGGATTCACGGCCGGGATCTCGAGAACGTG 324916 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 ||||||||||| |||||| | ||| | |||| ||||| ||||| ||||||||| Sbjct 324917 CGTGAGACATACGAGCTGATGTCGAAGGGTTTCTTCACCCACGCCACACCGACCCTCTTC 324976 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || || |||| || |||||| | |||||||| | || ||||| ||| Sbjct 324977 AACGCCGGCACCCCAAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGACGAC 325036 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || |||| ||||| | || || | |||||| || ||| ||| |||||| Sbjct 325037 AGCATTGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCGGCTGGC 325096 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAAT-AAATCTCGTATTCGGGGGACAAA 104520 || || || ||||| | || | | | ||| | || || ||| || || || Sbjct 325097 GGCATCGGCCTGCACGTGCACAACATCCGCGCCGCTGGAAGCT-ACATTGCCGGAACCAA 325155 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | || | | || ||||| ||||| || ||| ||| || ||||| || Sbjct 325156 TGGCACGTCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAACAACACTGCCCGCTACGT 325215 Query 104581 AAATCAAGCTG--GGC-GTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637 | || | | ||| || ||||| | |||| ||||| ||||||||||||||||| Sbjct 325216 GGACCAGGGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTACCTTGAGCCATGGCACGC 325275 Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA--GGCGCGGTGC 104695 || || | | || | | || | |||| || | || || |||| | Sbjct 325276 CGACGTCTTTGGCTTTTTGCTGCTGAAGCGCAACACGGGCAAAGATGACCAACGCGCT-- 325333 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGAG 104754 ||||| ||||||| || || ||| | |||||| | ||||||||| | || || | ||| Sbjct 325334 CGCGACCTCTTCTATGCGCTGTGGGTCCCAGATTTGTTCATGAAGCGTGTAAAGAGCGAG 325393 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGTG 104813 || || ||| | || | || ||| | || || ||| ||| ||| | |||| Sbjct 325394 -GGGAAGTGGACGCTGATGGACCCCAACACGTGCCCGGGCCTCAGCGACTGCTAT-GGTG 325451 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTG-CGACGGT 104871 | ||||| || || ||| ||||||| || || || |||| || |||| | Sbjct 325452 AAGAGTTCGAGCGACTCTACGAGCGCTACGAGGCGGAGGGCCGCGGCG--TGAAGACGAT 325509 Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || || |||||| || || || |||| || | |||||| || || | Sbjct 325510 TCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTT 325569 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 ||| | ||||| ||||| || ||| ||| || || ||||| | ||| |||||| Sbjct 325570 CATCTTGTACAAGGACGCGTGCAACAGCAAGTCAAACCAGAAGAACCTCGGTACGATCAA 325629 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 | | || ||| | || || || || |||| | || || |||||||| ||||| Sbjct 325630 GTGCTCGAATTTGTGCACCGAGATTGTGGAGTACACGTCGCCGGAGGAGACGGCCGTGTG 325689 Query 105052 TAACCTCGCATCAATCGCTCTCCC 105075 |||||| || || ||||| || || Sbjct 325690 TAACCTTGCCTCTATCGCGCTGCC 325713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257191073800