Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21 239 5e-58 seq7 105 7e-18 >seq21 Length=1153175 Score = 239 bits (264), Expect = 5e-58 Identities = 526/766 (69%), Gaps = 28/766 (4%) Strand=Plus/Plus Query 53192 TTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTAC 53251 |||||||| |||||| | || || ||||| || | | || |||||||| ||| Sbjct 324869 TTCATGCGTGTCGCCCTCGGGATTCACGGCCGGGATCTCGAGAACGTGCGTGAGACATAC 324928 Query 53252 GACTTAATGAGCCAAAAGTA-CTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 || | ||| | || || ||| || |||||||| || ||||| |||||||| || || Sbjct 324929 GAGCTGATGT-CGAAGGGTTTCTTCACCCACGCCACACCGACCCTCTTCAACGCCGGCAC 324987 Query 53311 GAATCACCCTCAGATGTCGAGCT---GCTTCCTGGTGGCGATGAAGGATGACTCGATCGA 53367 | || || ||| |||| |||||||||||||| |||||| ||| || || Sbjct 324988 CCCAAAGCCGCAAATG---AGCTCGTGCTTCCTGGTGGCGTCGAAGGACGACAGCATTGA 325044 Query 53368 CGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427 |||||||||||| ||||| |||||||| ||| ||| |||| | | || || ||||| Sbjct 325045 CGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCGGCTGGCGGCATCGG 325104 Query 53428 TATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCG 53486 | ||| ||| | ||| |||| || || | || || || || ||| || Sbjct 325105 CCTGCACGTGCAC-AACATCCGCGCCGCTGGAAGCTACATTGCCGGAACCAATGGCA-CG 325162 Query 53487 CCGAT-GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAG 53545 ||| || ||||||| ||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct 325163 TCGAACGGGCTCGTGCCGATGCTGCGCGTCTTCAACAACACTGCCCGCTACGTGGACCAG 325222 Query 53546 GGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATT 53605 || || || ||||||||||| | |||||| ||||||| ||||| |||||||||||| | Sbjct 325223 GGCGGCGGCAAGCGCAAGGGCGCCTTCGCCGTCTACCTTGAGCCATGGCACGCCGACGTC 325282 Query 53606 ATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGA--GATGCGCTGCCGTGACC 53663 | | ||| | |||| | || ||| | || || | ||||| || |||| Sbjct 325283 TTTGGCTTTTTGCTGCTGAAGCGCAACACGGGCAAAGATGACCAACGCGCT--CGCGACC 325340 Query 53664 TGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG--- 53720 | || || |||||| | || || | |||||| || ||| | ||| ||||| Sbjct 325341 TCTTCTATGCGCTGTGGGTCCCAGATTTGTTCATG--AAGCGTGTA-AAGAGCGAGGGGA 325397 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGT-CTACGGTGAGGAG 53779 ||||| |||||| ||| ||| |||||| ||||| ||| | | ||| ||||| ||| Sbjct 325398 AGTGGACGCTGATGGACCCCAACACGTGCCCGGGCCT-CAGCGACTGCTATGGTGAAGAG 325456 Query 53780 TT-TAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGG 53837 || | ||| | || || || |||| | |||||||| | ||||| | | ||| Sbjct 325457 TTCGAGCGA-CTCTA-CGAGCGCTACGAGGCGGAGGGCCGCGGCGTGAAGACGATTCAGG 325514 Query 53838 CGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGT 53897 ||| ||||| ||| ||| ||||| || ||| | |||||||| ||||| ||| | Sbjct 325515 CGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACGGGCGGGCCGTTCATCT 325574 Query 53898 GCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 |||||||| || |||| ||| |||||||||||| |||| Sbjct 325575 TGTACAAGGACGCGTGCAACAGCAAGTCAAACCAGAAGAACCTCGG 325620 Score = 105 bits (116), Expect = 7e-18 Identities = 306/456 (67%), Gaps = 15/456 (3%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| | |||||||| | || || ||||| |||||||||||||| || | ||||| | Sbjct 326141 GGCATGCGCAACTCATTACTGGTTGCGCCCATGCCAACCGCGTCCACCTCGCAGATTCTC 326200 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCG-GACCCTAGC 55596 |||||||||||| |||||||| | ||| | ||||| || | || || | | ||| Sbjct 326201 GGCAACAACGAGTGCTTCGAGCCTTTCACCTCAAACATTTATGTTCGGCGTGTGCTGAGC 326260 Query 55597 AGGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCA--GAAGATCAACAAG 55654 || ||||| || ||||||| ||||||||| |||||| || | | | | Sbjct 326261 -GGCGAGTTCCCTGTGGTCAACAAATACCTCGTCATGGACCT-CATCGCGCGTGGGC-TG 326317 Query 55655 TGGAACCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTC--CAGAATCTG- 55711 |||||| |||||| | || ||| | || | || || || ||| || || Sbjct 326318 TGGAACGAGCAGATGCGCAACGAGATTATCTCCTACAGTGGCTCAATCCTCAGCAT-TGA 326376 Query 55712 -GAGATTCC-TCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGA 55769 | ||||| | | | || | |||| | || ||||| |||||||||||||||||| | Sbjct 326377 CAACATTCCGGCCGAG-CTGAGGGAGCTGTATCGGACCGTGTGGGAGATTCCACAGCGCA 326435 Query 55770 GTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACA 55829 ||||| || ||| ||| || || ||||| |||||||| || || || ||| Sbjct 326436 AGCTGATCGATATGGCACGTGACCGCGGACAATACATTGACCAGTCGCAATCGCTAAACC 326495 Query 55830 TCTTCATGGAGA-ATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAG 55888 ||||| || ||| || | |||||| || | | || |||| ||| ||| | ||| || Sbjct 326496 TCTTCCTGCAGAGCCCCACCTCTGGCC-AGATCACATCCATGCTCTTCTACTGCTGGGAG 326554 Query 55889 AAGGGACTCAAGACGGGTATGTACTATCTGCGGACC 55924 || || ||||| || | ||||| |||| ||| Sbjct 326555 TCTGGGCTGAAGACAGGGGTCTACTACTTGCGTACC 326590 Score = 87.8 bits (96), Expect = 2e-12 Identities = 184/267 (69%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 117299 AGGCGAGTGAAAATGTAACGAG-AGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACC 117357 || || ||||| ||||| ||| |||| ||| |||||||| || |||||||||||| Sbjct 898249 AGCCGGGTGAAGATGTAGCGACCAGCT-GCATGGTCCTTGCCTCCGTGAAGACGCGTACC 898191 Query 117358 GAATTGTCCA--CTCG-GCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGC 117414 ||| || ||| || | || || | || || ||||||| ||||||||||| || || Sbjct 898190 GAACTGGCCATCCTTGCGCAGCA-GCGG--CACGTTGTTGCTGCCCACAAAGTCCTGCGC 898134 Query 117415 CAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGC 117474 || ||| ||||| ||| | ||| |||||||| || || | ||||| | Sbjct 898133 CATCCCGACGATCGTCTGCACGAGCGACTGCTCGCCATGGTGGTAGGCGGAGTGCTCGGA 898074 Query 117475 CACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGC 117534 |||||||| || ||||| | ||||| ||| | || ||| ||||| ||||| Sbjct 898073 GACGTAGCCGGCAAGCTGCACAACCTTGATGGAGTTCACCAAGTTGCGCTTGAAGCAGGA 898014 Query 117535 ATAAATCACCTTGCGCTGACTTGGCTT 117561 ||| | ||||||||||| ||||| Sbjct 898013 GAAAAGGATCTTGCGCTGACCCGGCTT 897987 >seq7 Length=600638 Score = 105 bits (116), Expect = 7e-18 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCC-ACCTGCCAGCCGCGTTCCAAACT 152086 ||| |||||||| || | | ||| || |||| | |||| |||| | ||||||| Sbjct 493808 CGTAAAGATGTAGCGCGGGGCGGCGTGGTCACTGCCGAGCTGCT-GCCGAGAGCCAAACT 493866 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || ||| |||| ||||||| ||||||| |||| ||| || || |||| |||| Sbjct 493867 GACCCTCTGGCACGAGCAGGTTGATGTTGTTGCCGCCAGTGAAGTTTTGCGCCATCTTCA 493926 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 | ||||| ||||||| || || |||||||| |||||| | |||| |||||| | Sbjct 493927 CGATCGTCTCCTGCAGCGAGGCCTCGCCGTGGTGGAACGCCGACACTTCCGAGATGTAGC 493986 Query 152207 CCGCCAACTGCGCCACCTTC 152226 ||| || ||||||||||||| Sbjct 493987 CCGACAGCTGCGCCACCTTC 494006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212614101000