Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq33 138 9e-28 seq25 89.7 4e-13 >seq33 Length=501070 Score = 138 bits (152), Expect = 9e-28 Identities = 375/572 (66%), Gaps = 14/572 (2%) Strand=Plus/Minus Query 29895 GGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGT 29954 ||||||| || ||||| || ||| |||| |||| ||| || || || || || | | Sbjct 366028 GGTAGACATGGGCGTCGCCGAGGGTGTGCACAAGCTCACCAGGCCGCAGGCCCGTCGCCT 365969 Query 29955 GAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCA 30014 || || | | ||||| || | |||| ||||||||| ||||| || ||||| |||| Sbjct 365968 TTGCAATAAGGATGGTGAGTAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGACCCA 365909 Query 30015 TGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC---TCCGTC---GCTCACGTAAA 30068 | || | ||| | |||||| | | || || ||||| | |||| | ||||||| | Sbjct 365908 TATCGCACGAGCGCTGGTACACCATGCAGGACAGCTCCTTTGCGTCCGTGTTCACGTAGA 365849 Query 30069 ACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGG 30128 ||||| | ||| ||||| || || ||||| || || | |||||||||| Sbjct 365848 ACTGAGCAAGCAAGTGACACGGTGGCAGCGCCATCTTGCTCAGAGCGCACGGGTTCCAGG 365789 Query 30129 CGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCA 30188 | | || || ||| | || | |||| | ||||| |||||| | | | Sbjct 365788 CAGTGAAGAGGAGGCGGCGATCGTTCGGGTCCGACTTGATGGTCTCCACGATGGCCTTGA 365729 Query 30189 GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 30248 ||| ||||||||| || ||| || ||| | | | ||||||| || ||||| | Sbjct 365728 TCTGGTCCACCCCCTCGCCATTGTAATCCGCCTCGAAGCCTTTGTACTCGGCCCCGAAGT 365669 Query 30249 GCCTCCACTGGAACCCGTACACCGGTCCCAGGTC----TCCCTCTTCCCTGTGCTCGAAG 30304 | | ||||||||| ||||| || || || || || ||| | ||| |||| ||| Sbjct 365668 GACGCCACTGGAAGCCGTAGACAGGACCGAGATCCATCTCCTTATTCTCTGTC----AAG 365613 Query 30305 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCA 30364 || | |||||| ||| || | || |||||| ||||||| || | || ||||| || Sbjct 365612 CCGCGGCTGTCCAGAAACTCGCGCGAGCCGTTGCCGTCCCAAATATGGACGCCCTTATCC 365553 Query 30365 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30424 | ||| | | ||| || || | | ||||||||||||||| || ||| | Sbjct 365552 GCCAGCAGCTGCGCGTTCGTTTCACCGCGCAGGAACCACAGCAGCTCTTCGCAGACACCG 365493 Query 30425 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||||| || | ||| ||||| || || || Sbjct 365492 CGCCAAAATACGCGCTTTGTCGTCAGTAGCGG 365461 >seq25 Length=437616 Score = 89.7 bits (98), Expect = 4e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 52826 CCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCA 52885 ||| ||||||||||||||| || ||||| || || || ||||||||||||||||| || Sbjct 23082 CCAAGAGGACATGCCCTTCAACCGCGACGGCGTCGTACCGGACCTCATCATCAACCCTCA 23023 Query 52886 CGCCTTTCCCTCCAGGATGACCGT 52909 |||| |||||||| | ||||| || Sbjct 23022 CGCCATTCCCTCCCGCATGACGGT 22999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307948805540