Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq33 123 2e-23 >seq33 Length=501070 Score = 123 bits (136), Expect = 2e-23 Identities = 379/582 (65%), Gaps = 8/582 (1%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||| |||||||| || || || | ||| || || ||| ||||||||||||||| Sbjct 365461 CCGCTACTGACGACAAAGCGCGTATTTTGGCGCGGTGTCTGCGAAGAGCTGCTGTGGTTC 365520 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 || | || | |||||| | || ||| || ||| || | || ||||||| Sbjct 365521 CTGCGCGGTGAAACGAACGCGCAGCTGCTGGCGGATAAGGGCGTCCATATTTGGGACGGC 365580 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTG 34402 |||| || || || |||||||||| || || || || ||||| || | Sbjct 365581 AACGGCTCGCGCGAGTTTCTGGACAGCCGCGGCTTGACAGAGAATAAGGAGATGGATCTC 365640 Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462 || || |||||||| ||||||||| | ||||| ||||| ||||| || ||| ||| Sbjct 365641 GGTCCTGTCTACGGCTTCCAGTGGCGTCACTTCGGGGCCGAGTACAAAGGCTTCGAGGCG 365700 Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAAC 34522 || || || |||| | ||||||| | || | | | || ||| | ||| | || Sbjct 365701 GATTACAATGGCGAGGGGGTGGACCAGATCAAGGCCATCGTGGAGACCATCAAGTCGGAC 365760 Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 || | || | | || | | || ||||||||| | ||| ||||||| Sbjct 365761 CCGAACGATCGCCGCCTCCTCTTCACTGCCTGGAACCCGTGCGCTCTGAGCAAGATGGCG 365820 Query 34583 CTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT---CGCGAATG---GGGAGCTGTC 34635 || || ||||| ||| || ||| || |||||||| | || | | ||||||||| Sbjct 365821 CTGCCACCGTGTCACTTGCT-TGCTCAGTTCTACGTGAACACGGACGCAAAGGAGCTGTC 365879 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||| | | || || || ||| | || ||||| | || || || |||||||| || Sbjct 365880 CTGCATGGTGTACCAGCGCTCGTGCGATATGGGTCTCGGCGTCCCCTTCAACATCGCCTC 365939 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| || ||||| | | || || | | ||| || ||||| ||||| || Sbjct 365940 CTACGCGCTACTCACCATCCTTATTGCAAAGGCGACGGGCCTGCGGCCTGGTGAGCTTGT 365999 Query 34756 GCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 ||| || | || || || ||| |||||| |||||| |||| Sbjct 366000 GCACACCCTCGGCGACGCCCATGTCTACCGCAACCACGTCGA 366041 Score = 123 bits (136), Expect = 2e-23 Identities = 379/582 (65%), Gaps = 8/582 (1%) Strand=Plus/Minus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 |||| |||||| |||||| ||| || || || | || ||||| ||||| ||||| | Sbjct 366041 TCGACGTGGTTGCGGTAGACATGGGCGTCGCCGAGGGTGTGCACAAGCTCACCAGGCCGC 365982 Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667 | ||| | | || || | | ||||| || ||||| || |||||||| || Sbjct 365981 AGGCCCGTCGCCTTTGCAATAAGGATGGTGAGTAGCGCGTAGGAGGCGATGTTGAAGGGG 365922 Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCC---CATTC 6724 || || | ||||| || | ||| || || || | | ||||||||||||| | | | Sbjct 365921 ACGCCGAGACCCATATCGCACGAGCGCTGGTACACCATGCAGGACAGCTCCTTTGCGTCC 365862 Query 6725 GCG---ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 | | |||||||| || ||| || ||| ||||| || ||||||||| ||| | Sbjct 365861 GTGTTCACGTAGAACTGAGCA-AGCAAGTGACACGGTGGCAGCGCCATCTTGCTCAGAGC 365803 Query 6781 CTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTC 6840 ||||||||| || | | || | | || | |||| | ||| | ||| || Sbjct 365802 GCACGGGTTCCAGGCAGTGAAGAGGAGGCGGCGATCGTTCGGGTCCGACTTGATGGTCTC 365743 Query 6841 GATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATA 6900 | | | || | ||||||| | |||| || || ||||| ||| || || Sbjct 365742 CACGATGGCCTTGATCTGGTCCACCCCCTCGCCATTGTAATCCGCCTCGAAGCCTTTGTA 365683 Query 6901 CTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960 ||| ||||| ||||| | ||||||||| |||||||| || || | || ||||| Sbjct 365682 CTCGGCCCCGAAGTGACGCCACTGGAAGCCGTAGACAGGACCGAGATCCATCTCCTTATT 365623 Query 6961 AGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCAC 7020 || || || || |||||||||| || || || |||| ||||||| || | || Sbjct 365622 CTCTGTCAAGCCGCGGCTGTCCAGAAACTCGCGCGAGCCGTTGCCGTCCCAAATATGGAC 365563 Query 7021 CCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTC 7080 ||| || ||| || | |||||| | || | || ||||||||||||||| || Sbjct 365562 GCCCTTATCCGCCAGCAGCTGCGCGTTCGTTTCACCGCGCAGGAACCACAGCAGCTCTTC 365503 Query 7081 GACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 | || || ||| | || || || |||||||| ||||| Sbjct 365502 GCAGACACCGCGCCAAAATACGCGCTTTGTCGTCAGTAGCGG 365461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448259626376400