Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq30 167 5e-36 seq15 96.9 7e-15 seq7 84.2 5e-11 >seq30 Length=2596710 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||||||| || ||||| || | |||| || || |||||||||||||| || Sbjct 1328704 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1328763 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 1328764 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1328823 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| ||||| | || || Sbjct 1328824 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACC 1328883 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||||||||| || || | ||||| ||||| |||||||| Sbjct 1328884 TCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1328930 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 282879 CGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTG 282938 |||||||| || ||||| || | |||| || || |||||||||||||| || |||||| Sbjct 1329124 CGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTG 1329183 Query 282939 CGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCC 282998 ||||| ||||| || || || ||||| ||||||| || || ||||| ||| || ||| Sbjct 1329184 CGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCC 1329243 Query 282999 TCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGA 283058 |||||||| |||||||| || || ||| | ||||| ||||| | || || || || Sbjct 1329244 TCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGGCTCCACCTCCAGC 1329303 Query 283059 GTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||||||| || || | ||||| ||||| |||||||| Sbjct 1329304 GCGATCGTCTTGCCGGTGAGCGTCTTCACGAAGATCTGCAT 1329344 >seq15 Length=633270 Score = 96.9 bits (106), Expect = 7e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||||| |||||||| | || || || || |||||||| | || | |||| | Sbjct 479211 GAGTTCATCTGCGACGCGCTGCCGGTGCGACTGATTGGCATGAACTCGGAGTTGATGGCG 479152 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| ||||| || ||||| | |||| |||| || | ||||| || Sbjct 479151 CAGTACATCGAGTTCGTGGCGGATCGACTGCTCGTCTCGCTCGGTGAGGAGAAGCACTAC 479092 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 ||| | | | | || |||| ||||||||| | || || || ||||| || || |||||| Sbjct 479091 AACGCGACGCAGCCATTCGACTTTATGGAGATGATCTCGCTGCAGGGTAAGACGAACTTC 479032 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||| ||| || |||| || || |||||| Sbjct 479031 TTCGAGAAGAAGGTGGGCGAGTACCAGAAGGCC 478999 >seq7 Length=600638 Score = 84.2 bits (92), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 273801 GCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTT 273860 || ||||| |||| ||| ||| || |||||||||||||| |||| ||| ||| Sbjct 493830 GCGTGGTCACTGCCGAGCTGCTGCCGAGAGCCAAACTGACCCTCTGGCACGAGCAGGTTG 493889 Query 273861 ATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACC 273920 |||||||||| || | | | || ||||| |||||||| ||| |||| || || || Sbjct 493890 ATGTTGTTGCCGCCAGTGAAGTTTTGCGCCATCTTCACGATCGTCTCCTGCAGCGAGGCC 493949 Query 273921 TCGCCGTGGTG 273931 ||||||||||| Sbjct 493950 TCGCCGTGGTG 493960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732561383730