Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq16 199 5e-46 >seq16 Length=488607 Score = 199 bits (220), Expect = 5e-46 Identities = 460/684 (67%), Gaps = 27/684 (4%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| |||| || ||||||||| |||||||||| ||||| || ||| ||| Sbjct 120102 AGCTGCGCCTTGAGGGCATCAACGTGGTTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGC 120161 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | || || ||| || ||||| | ||| | | | ||| ||||| | |||| Sbjct 120162 ACAAGCTCACCAGGCCGCAGACCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAG 120221 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||| ||||||||||| || || || |||||||| | |||||||||||||| | |||| Sbjct 120222 GAGGCGATGTTGAAGGGGACACCAAGACCCATGTCGCACGAGCGCTGGTACAACATGCAG 120281 Query 145852 GAGAGCTC---CCCGCCCG---CCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAG 145904 || ||||| | | | | |||||||||||| ||| || | |||||| |||||||| Sbjct 120282 GATAGCTCGCTCGTGTCTGTGTTCACGTAGAACTGAGCA-AGCAAGTGGCACGGCGGCAG 120340 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 ||||| |||| | |||||||||||| |||| | ||| | | | | || Sbjct 120341 CGCCATCTTTTGCAGCGCGCACGGGTTCCAGGCAGTGACTAGGAGGCGGCGGTCGTTCGG 120400 Query 145965 GTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 |||| ||||| ||||| | || || | ||| ||||||||| || | || ||| Sbjct 120401 GTTCGCCTTGATGGTCTCCACGATGAG---CTTGATCTGGTCCACCCCTTCGCCGTCGTA 120457 Query 146022 ATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 | | | | || ||| | ||||||||||| | ||||||||| |||||||| || Sbjct 120458 GTTCGCTTCAAACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGG 120517 Query 146082 CCCCAGGTCC----CCGGGCTCCCTGTGCCCCAGCC-CGGCCCGGGCGAGGAAGTCCCGG 146136 || |||||| || || |||| | |||| ||| | | |||| || || || Sbjct 120518 GCCGAGGTCCATCTCCTTATTCTCTGT---CAAGCCGCGG--CTGTCGAGAAACTCGCGC 120572 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | ||| | Sbjct 120573 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCTGCCAGCAGCTGCGCACTCGTCTCC 120632 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | |||||| |||||||| ||| || || | ||||||||| | ||| || ||| Sbjct 120633 CCGCGCAGGAACCACAGCAGCTCCTCGCACACGCCACGCCAGAAGACACGCTTCGTCGTC 120692 Query 146257 AGCAGGG---GGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGG 146313 ||||| | || | | | || |||||| | |||| | ||||||| | | | Sbjct 120693 AGCAGCGGCAGGCGGTTGTCGCGTAGGGAGAAGCGCATCTGGGCGCCGAAGAGGCCGATG 120752 Query 146314 GTGCCCACGCCCGTCCTGTCCCCC 146337 ||||||||||| || | |||| || Sbjct 120753 GTGCCCACGCCGGTGCGGTCCTCC 120776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073171027680