Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq76 91.5 2e-13 >seq76 Length=120750 Score = 91.5 bits (100), Expect = 2e-13 Identities = 169/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || |||||||| || ||| ||||||||||| | || || |||||| | Sbjct 111918 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 111859 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 |||| || || ||||| || || ||||| || ||||| || | | |||| || ||||| Sbjct 111858 ACGTCAGCCCTGGCATCAGACCGCGCTTCTTCAGCCAGAACA-GCGCGCAGAACGACCCG 111800 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || || || || ||||||||| | | || | ||| | | || |||||| Sbjct 111799 GAAAAGAAAATGCCCTCCACCGCGGCAAAGCCGATCAGCCGCTCCTGAAAGCTCGCGCTG 111740 Query 50131 -TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 || | |||||| ||||| || |||||||| | | || || ||||| | ||| Sbjct 111739 CTCCCG-ATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTAT 111681 Query 50190 GGC 50192 || Sbjct 111680 CGC 111678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264382646880