Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 >seq2 Length=1059033 Score = 89.7 bits (98), Expect = 5e-13 Identities = 217/323 (67%), Gaps = 7/323 (2%) Strand=Plus/Minus Query 157490 TGCCACGGTTCAACGTACACTGCTTGGGCTCCTTTTCGCTT---GCCACCTTGATCCACG 157546 ||||| || || | || || || ||| || || ||||| |||||| || |||||| Sbjct 329235 TGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGCCACCCTGGTCCACG 329176 Query 157547 TGACGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTC 157606 | || | | || || || || || |||||||| | || ||| | | ||||||||| Sbjct 329175 TAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCCGTTC 329116 Query 157607 GTAGATTTTATTTTGCTGTTGCGGC-CGCGTACGCTGTTCACGTTCAATCCAATACCGCC 157665 ||| ||| | |||| || | |||| | | ||| ||||| || ||||||||||| Sbjct 329115 GTACCAGCTATATAGCTGCC-CGCCGCGCGGATGTTGTGCACGTGCAGGCCAATACCGCC 329057 Query 157666 GCCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATC 157725 | | ||| ||||| ||||| || || | |||| ||||||||| ||||| || Sbjct 329056 GGCCGCTTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGTAGATGCCGTCGATGCTGTC 328997 Query 157726 -GCTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGAGTCAGACTGCCGGCAGCGA 157784 | ||| | | || || || || || ||||| ||||| || | ||||||| | Sbjct 328996 TTCCTTCGA-CGCCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGCCGGCGTTAA 328938 Query 157785 ACATGGTTGGGCTTGCGTGCGTG 157807 | | ||| ||| | ||||| ||| Sbjct 328937 AGAGGGTCGGGGTGGCGTGGGTG 328915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011281861440