Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq76 114 2e-20 seq55 111 2e-19 >seq76 Length=120750 Score = 114 bits (126), Expect = 2e-20 Identities = 159/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| || |||||||| || || ||| ||| |||||||| ||||| Sbjct 111896 GTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGGCATCAGACC 111837 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| | ||| || || || || || ||||| || |||||||| Sbjct 111836 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCCCTCCACCGC 111777 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 || || | | || ||||| || ||| || | | | | |||| || || Sbjct 111776 GGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCACCGCACGGC 111720 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||||| |||||| |||| ||| ||||||| ||||| ||||| Sbjct 111719 CCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 111678 >seq55 Length=202884 Score = 111 bits (122), Expect = 2e-19 Identities = 158/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| || |||||||| || || ||| ||| |||||||| ||||| Sbjct 180105 GTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCTGGCATCAGACC 180164 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| | ||| || || || || || || || || |||||||| Sbjct 180165 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAAAAAATGCCCTCCACCGC 180224 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 || || | | || ||||| || ||| || | | | | |||| || || Sbjct 180225 GGCAAAGCCGATCAGCCGCTCCTGAA---AGCTCGCACTGCTCCCGATCCACCGCACGGC 180281 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||||| |||||| |||| ||| ||||||| ||||| ||||| Sbjct 180282 CCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGTATCGC 180323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349926275360