Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq74 132 1e-26 >seq74 Length=133848 Score = 132 bits (146), Expect = 1e-26 Identities = 244/353 (69%), Gaps = 11/353 (3%) Strand=Plus/Minus Query 37168 CTGG-TTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGG 37226 |||| |||| ||||| |||||| | || || ||| || || | | | || || || Sbjct 71888 CTGGCTTACTCGCAAGGGTGCTACTTCTGCGCGTATGGGTGAGCTCGCCGTGATTCCGGG 71829 Query 37227 CTCGATGGGTGC--GAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGC 37284 || ||||| || | || | ||| || || |||||||||| ||| | | |||| Sbjct 71828 GTCCATGGGGGCCTGCAGCTA--CATTGTGCGAGGCAAGGGAAGCGCCGCAAGCTACTGC 71771 Query 37285 TCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACA 37344 || ||| ||||||||||| || ||||| | ||| || || || ||||| Sbjct 71770 TCCTGCTCGCACGGTGCCGGGCGCCGCTACAGCCGCGGCGAGGCGCGCCGGCGATTCACT 71711 Query 37345 GTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATC 37404 || | ||||||||||| ||||| || |||||||||||||| || | ||| | Sbjct 71710 GTGGCAGATCATGAGGCTGCCACACTGGGCATCGAGTGCCGCAAGGACAGCAGCGTGTTG 71651 Query 37405 GACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTG 37464 |||||||| || || ||||||||| ||||||||| |||||||| || || || |||| Sbjct 71650 GACGAGACACCTGCCGCTTACAAGAGCATCGATGCTGTCATGGCTGCTCAGGACGACCTG 71591 Query 37465 GTGGACATCGTGCACACG---CTGCGCCAAGTCGTTTGCGTGAAGGGTTGAGG 37514 || || |||| |||| |||| |||||| | || ||||| || ||||| Sbjct 71590 GTCGAGGTCGT---CACGGTATTGCGGCAAGTCCTATGTGTGAAAGGGTGAGG 71541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139282386237904