Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 1e-15 >seq2 Length=1059033 Score = 98.7 bits (108), Expect = 1e-15 Identities = 219/323 (68%), Gaps = 7/323 (2%) Strand=Plus/Minus Query 151718 TGCCACGGTTCAACGTACACTGCTTGGGCGCCTTTTCGCTT---GCCACCTTGATCCACG 151774 ||||| || || | || || || |||||| || ||||| |||||| || |||||| Sbjct 329235 TGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGCCACCCTGGTCCACG 329176 Query 151775 TGACGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTC 151834 | || | | || || || || || |||||||| | || ||| | | ||||||||| Sbjct 329175 TAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGTTCGACGTGCCGTTC 329116 Query 151835 GTAGATTTTATTTTGCTGTTGCGGC-CGCGTACGCTGTTCACGTTCAATCCAATACCGCC 151893 ||| ||| | |||| || | |||| | | ||| ||||| || ||||||||||| Sbjct 329115 GTACCAGCTATATAGCTGCC-CGCCGCGCGGATGTTGTGCACGTGCAGGCCAATACCGCC 329057 Query 151894 GCCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATC 151953 | | ||| ||||| ||||| || || | |||| ||||||||| ||||| || Sbjct 329056 GGCCGCTTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGTAGATGCCGTCGATGCTGTC 328997 Query 151954 -GCTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGTGTCAGAGTGCCGGCAGCGA 152012 | ||| | | || || || || || ||||| ||||| || | |||||||| | Sbjct 328996 TTCCTTCGA-CGCCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGCCGGCGTTAA 328938 Query 152013 ACATGGTTGGGCTTGCGTGCGTG 152035 | | ||| ||| | ||||| ||| Sbjct 328937 AGAGGGTCGGGGTGGCGTGGGTG 328915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488540995454400