Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq16 224 1e-53 >seq16 Length=488607 Score = 224 bits (248), Expect = 1e-53 Identities = 414/598 (69%), Gaps = 22/598 (4%) Strand=Plus/Plus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 || |||| || ||||||||| |||||||||| ||||| || ||||||||||||| || Sbjct 120111 TTGAGGGCATCAACGTGGTTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGCACAAGCTCA 120170 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || ||| || || ||| | | ||| | | | ||||||||||| |||| ||| ||| Sbjct 120171 CCAGGCCGCAGACCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAGGAGGCGATG 120230 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC- 147095 ||||||||||| || || |||||||| | ||| | |||||||| | ||| || ||||| Sbjct 120231 TTGAAGGGGACACCAAGACCCATGTCGCACGAGCGCTGGTACAACATGCAGGATAGCTCG 120290 Query 147096 CCCGT-----CGGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | ||| | |||||| ||||| ||| || | ||||||||||||||||||||| Sbjct 120291 CTCGTGTCTGTGTTCACGTAGAACTGAGCA-AGCAAGTGGCACGGCGGCAGCGCCATCTT 120349 Query 147150 GGGCAGGTCCGCG---GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCT 147206 |||| |||| ||||||||||| | ||| | || || | | | |||||| Sbjct 120350 TTGCAG---CGCGCACGGGTTCCAGGCAGTGACTAGGAGGCGGCGGTCGTTCGGGTTCGC 120406 Query 147207 CTTAA---TCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGT 147263 ||| | |||| |||| | | | | ||||||||| || | ||| ||||||| | Sbjct 120407 CTTGATGGTCTCCACGATGA---GCTTGATCTGGTCCACCCCTTCGCCGTCGTAGTTCGC 120463 Query 147264 CCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAG 147323 | | || ||| ||||| ||||| | ||||||||||||||| || || || || Sbjct 120464 TTCAAACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAG 120523 Query 147324 GTCGCCGGGCTTTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGG 147382 ||| ||| | | | ||||| || | | | |||||||||| | || |||| | Sbjct 120524 GTCCATCTCCTTATTCTCTGTCAAGCCGCGGCTG-TCGAGAAACTCGCGCGAGCCGTTGC 120582 Query 147383 CGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 ||||||||||| | ||||| | | ||| || | ||| || || | || Sbjct 120583 CGTCCCAGATGTGAATGTCCTTGTCTGCCAGCAGCTGCGCACTCGTCTCCCCGCGCAGGA 120642 Query 147443 ACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 |||| ||||||||||| | || || | ||| ||||| | ||| || |||||||| || Sbjct 120643 ACCACAGCAGCTCCTCGCACACGCCACGCCAGAAGACACGCTTCGTCGTCAGCAGCGG 120700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484411548800