Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=1059033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 252/386 (65%), Gaps = 5/386 (1%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCACACGCCGTT-CTGTTCAACTCGCTTCATAAACAAATCCGGC 131671 ||||| ||| |||| |||| || | || |||| | ||| ||||||||| ||| || Sbjct 329381 TGGGATCCATCAGCGTCCACTTCCCCTCGCTTTTCA-CACGCCTCATAAACAGATCTGGG 329323 Query 131672 ACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttC 131731 | ||| | ||| || || || || | || | || ||| | ||| | | |||| Sbjct 329322 ATCCACAGCGCATAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTC 329263 Query 131732 AAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCT 131791 | | |||| | || | ||| || |||||||| || | ||| || || | ||||| Sbjct 329262 AGCAGCAGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCC 329203 Query 131792 TTGCGCTTACCG---CCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATG 131848 |||||||||||| || || | || | || | |||||||| | ||||| | ||| Sbjct 329202 TTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATT 329143 Query 131849 GGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATT 131908 ||| | | ||||| | | || || || | || |||||||| || | ||| Sbjct 329142 GGCACGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATATAGCTGCCCGCCGCGCGGATG 329083 Query 131909 TTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGA 131968 ||||| |||| || |||||||| ||| | ||| ||| | ||||| | | || Sbjct 329082 TTGTGCACGTGCAGGCCAATACCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGC 329023 Query 131969 GTGTTATAGATACCTTCCACGCTGTC 131994 |||| ||||| || || | |||||| Sbjct 329022 GTGTCGTAGATGCCGTCGATGCTGTC 328997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931851987104