Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2 102 3e-16 >seq2 Length=1059033 Score = 102 bits (112), Expect = 3e-16 Identities = 290/436 (67%), Gaps = 10/436 (2%) Strand=Plus/Plus Query 254834 GAAGACAGTATCCAAGGCATCTTCGAAACGCTATCGCGATGCGCATTCGTGAGTCAATCG 254893 |||||||| ||| | ||||||| ||| ||||| | ||||| | | || || || Sbjct 328994 GAAGACAGCATCGACGGCATCTACGACACGCTGAAGGAGTGCGCGGTGATCAGCAAAGCG 329053 Query 254894 AGCGGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCCAGCGGCACACCGAT-TCGCTC 254952 |||||| | || || || | |||| | ||||| |||| || | || | ||| Sbjct 329054 GCCGGCGGTATTGGCCTGCACGTGCACAACATCCGCGCG-GCGGG-CAGCTATATAGCTG 329111 Query 254953 G-ACGAACGG-ACG--GAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGG 255008 | |||||||| ||| || ||| || | | |||||| | || || ||||||||| | Sbjct 329112 GTACGAACGGCACGTCGAACGG--GC-TCGTGCCAATGCTACGCGTCTTCAACAACACCG 329168 Query 255009 CTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGC 255068 | |||||||| || || || ||||| || ||| || || || || |||| || |||| Sbjct 329169 CCCGCTACGTGGACCAGGGTGGCGGTAAGCGCAAGGGCGCCTTTGCCGTCTATCTCGAGC 329228 Query 255069 CGTGGCACGCCGACATTGAACGGTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGC 255128 | |||||||||||| | | ||| | |||||| ||| || || | || || | Sbjct 329229 CCTGGCACGCCGACGTCTTTGGCTTTCTGCTGCTGAAACGCAACACGGGAAAAGATGACC 329288 Query 255129 TGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGG 255188 | |||||||||| ||| | || | ||| | |||||||||||| | || ||| Sbjct 329289 AGCGCGCCCGCGACCTCTTCTATGCGCTGTGGATCCCAGATCTGTTTATGAGGCGTGTGA 329348 Query 255189 AACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTT 255248 || | || | || |||| || ||| ||||||| | || || || ||| | | Sbjct 329349 AAAGCGAGGGGAAGTGGACGCTGATGGATCCCAACACGTGCCCGGGCCTCAGCGATTGCT 329408 Query 255249 GGGGTGACGAGTTTGA 255264 ||||| |||||||| Sbjct 329409 ATGGTGAGGAGTTTGA 329424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588325987526940