Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 181 1e-40 >seq6 Length=511626 Score = 181 bits (200), Expect = 1e-40 Identities = 411/608 (68%), Gaps = 24/608 (4%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| | ||||| | || | ||||||| ||||||| || ||||| || || ||| Sbjct 362912 AGCTGCACTTTCAGAGCATCGATGTGGTTGCGGTAGACATGGGCGTCGCCGAGCGTGTGC 362853 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | || ||||| ||| || |||||| | || | | | ||| ||||| | |||| Sbjct 362852 ACGAGTTCCCCAGGCCGCAGACCCGTGGCTTTTGCCATAAGGATGGTGAGCAGCGCGTAG 362793 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||| ||||||||||| || || ||||||||||| | |||||||||||||||| |||| Sbjct 362792 GAGGCGATGTTGAAGGGGACGCCGAGCCCCATGTCGCACGAGCGCTGGTACAGCATGCAG 362733 Query 145852 GAGAGCTC---CCCGCCCG---CCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAG 145904 || ||||| | || ||| |||||||||||| ||| || | ||| ||||||||||| Sbjct 362732 GACAGCTCCTTCGCGTCCGTGTTCACGTAGAACTGAGCA-AGCAAGTGACAGGGCGGCAG 362674 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 ||||| || |||| | ||||||||||| || | | ||| | | | | || Sbjct 362673 CGCCATCTCGTGCAGCGCGCATGGGTTCCAGGCAGTTAACAGGAGGCGGCGGTCGTTTGG 362614 Query 145965 GTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 |||| ||||| ||||| | || | ||| ||||||||| || | || ||| Sbjct 362613 GTTCACCTTGATGGTCTCCACGAT---GGATTTGATCTGGTCCACCCCTTCGCCATCGTA 362557 Query 146022 ATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 || | || | || |||| || |||||||| | ||||||||| |||||||| || Sbjct 362556 ATTCGCCTCAAACCCCTTGTACTGTGCTCCGAAGTGGCGCCACTGGAATCCGTAGACAGG 362497 Query 146082 CCCCAGGTCCCCGGGCTCCCTGT--GCC--CCAGCC-CGGCCCGGGCGAGGAAGTCCCGG 146136 || || ||| |||| | | ||| | |||| ||| | | |||| || || || Sbjct 362496 ACCGAGATCC---ATCTCCTTATTCGCCGTCAAGCCGCGG--CTGTCGAGAAACTCGCGC 362442 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || ||||| | |||||||| | | | || | | | ||| | || || || Sbjct 362441 GAGCCGTTACCATCCCAGATGTGAATGTCCTTGTCCGCCAGCAACTGGGCGTTTGTTTCG 362382 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | |||||| |||||||| ||| || || | |||||| || | ||| || ||| Sbjct 362381 CCGCGCAGGAACCACAGCAGCTCCTCGCACACGCCGCGCCAGAAAACGCGCTTCGTTGTC 362322 Query 146257 AGCAGGGG 146264 | ||| || Sbjct 362321 AACAGCGG 362314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076541841400