Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq28 111 1e-19 seq31 102 7e-17 >seq28 Length=1152636 Score = 111 bits (122), Expect = 1e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 133210 TGACGAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACAT 133269 ||||||| |||| ||| ||||| | ||||||||| || || || | || |||| || Sbjct 316702 TGACGAGGTACTTGTTCACCACAGGGAACTCGCCGCTCAGCACACGGCGGACGTATATAT 316643 Query 133270 TCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGG 133329 |||| ||||| ||||||||| | |||||||||||||| ||||||| || | ||| || | Sbjct 316642 TCGAGGTGAAGGGTTCGAAACACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTG 316583 Query 133330 GCATGTACGCCACCAACAAAGAGTTTCTTACGCC 133363 ||||| | ||||| || ||||| | || ||| Sbjct 316582 GCATGGGGGACACCAGCAGTGAGTTGCGTATGCC 316549 >seq31 Length=1340778 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||||| ||| | || ||||| || || |||||||| || Sbjct 825902 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 825961 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||||| ||||| || || || |||| || |||||||| || || || Sbjct 825962 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 826021 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | |||| ||||| | ||| ||| Sbjct 826022 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 826081 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 |||| | | ||| ||||||||||| || || || || |||||||||| Sbjct 826082 TCGAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATGG 826130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830214944220