Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq22 114 1e-20 >seq22 Length=644210 Score = 114 bits (126), Expect = 1e-20 Identities = 244/359 (68%), Gaps = 4/359 (1%) Strand=Plus/Minus Query 50500 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50559 ||||| || | ||||| ||||||||| | || ||||||||||| || | ||||| ||| Sbjct 486039 ATGCCGGGATTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGAC 485980 Query 50560 TTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTG 50619 || |||||| || ||||| ||| | | || | ||| | | ||| | || Sbjct 485979 TTCGCGTGTCTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGCGTGCTG 485920 Query 50620 GACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTG 50679 || || | || || || |||||||| ||||| || ||||| | || ||| Sbjct 485919 GAGATCATTGTGGATGCGGTGAACATCGAACGCGAGTTCATCTGTGACGCGCTTCCGGTG 485860 Query 50680 GCATTGTTGGGCATGAACGCAGACATGATGTGCG-AGTACATTGAGTTTGTTGCAGACAG 50738 || | |||||||| || || ||||| ||| ||||||||||||| || || ||| | Sbjct 485859 CGGCTGATTGGCATGAATGCTGAGCTGATG-GCGCAGTACATTGAGTTCGTCGCGGACCG 485801 Query 50739 ATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTAT 50798 || | || |||||| | ||| |||| || ||| | | |||||| || || Sbjct 485800 GCTGCTTGTGTCGCTGGGCGAGGAGAAGCACTACAACGCAACTCAGCCCTTTGACTTCAT 485741 Query 50799 GAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGACGTGTAGGCGAATAC 50856 | | | || ||| || |||||||||||||||| ||||| |||| | || ||||| ||| Sbjct 485740 GGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGAAGAAG-GTGGGCGAGTAC 485683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014178181200