Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq28 235 1e-56 >seq28 Length=1152636 Score = 235 bits (260), Expect = 1e-56 Identities = 1120/1754 (64%), Gaps = 62/1754 (4%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || || || ||||| ||||| |||||||| || |||| ||||| || ||| Sbjct 315253 ATTGTGGAGCGGCCTCAGCAGATGTTTATGCGTGTCGCCCTTGGCATCCACGGCAGAGAT 315312 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGC 363557 | | || | ||| || || || || || | | ||| | ||||| ||||| Sbjct 315313 CTCAACAACGTGCGTGAGACGTACAATCTGATGTCGATGGGCT----TTTTCACCCACGC 315368 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 ||| ||||| | | ||| ||||| || | || || || ||| || ||||| || | Sbjct 315369 CACTCCAACCCTCTTCAACGCTGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGT 315428 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 ||||||||| |||||| || |||| || || || ||| | || || | || Sbjct 315429 GGCGTCGAAGGACGACAGCATCGACGGCATCTACGATACGCTGAAGGAGTGCGCCGTGAT 315488 Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTA 363737 |||| || ||||| |||||| | | ||||| | || || ||| || Sbjct 315489 CAGCAAGGCGGCCGGCGGCATTGGTCTGCATGTGCACAACATCCGCGCCGCCGGCAGCTA 315548 Query 363738 CATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 |||| || || || ||||| || || || || ||||| || || || |||| Sbjct 315549 CATTGCTGGAACCAACGGCACGTCGAACGGACTCGTACCAATGCTGCGCGTCTTCAACAA 315608 Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857 ||||| | ||||| |||||||| || || |||||||| || || || || | ||||| Sbjct 315609 CACTGCCCGCTACGTAGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCT 315668 Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGA-GCTCCGGAAAAACACGGGAAAAG 363916 |||||| ||||||||| | |||| ||||| || ||| | |||||||| || | Sbjct 315669 CGAGCCCTGGCATGCCGATGTCTTTG-GTTTCCTGTTGCTGAAGCGCAACACGGGCAAGG 315727 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 | || ||| || ||||| || ||||| || | ||| | | ||| || ||||||| Sbjct 315728 ATGACCAGCGCGCCCGTGACCTCTTCTACGCGTTGTGGATCCCGGACTTGTTCATGAAGC 315787 Query 363977 GCGTGGAGGCAGGTAAGAATTGGTC-ACTCTTTTG--CCC--ACACGAATGTCCAGGTCT 364031 | || | | || || ||| || || || ||| ||||| || || || || Sbjct 315788 GTGTCAA---AAGTGAGGGGCGGTGGACGCTGATGGACCCTAACACG--TGCCCGGGCCT 315842 Query 364032 TTCCGA-TGT-ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGA 364089 ||| || |||| | | || | |||||| ||| || || |||| || Sbjct 315843 CAGCGACTGCCATGGCGAGGCGTTCGAGCGGCTCTA--CGAGCGCTACGAGGCGGAAGGC 315900 Query 364090 AAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATT 364149 | | ||||| || | || ||| || | |||||||||||| |||| || ||||| Sbjct 315901 CGCGGTGTCAAGACGATCCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCTCAGATC 315960 Query 364150 GAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 ||||| || || | || ||||||| ||| | |||||| ||||||| |||||| || Sbjct 315961 GAGACGGGCGGGCCATTCATCCTGTACAAGGATGCATGCAACAGCAAGTCAAACCAGAAG 316020 Query 364210 CACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCT 364266 ||||||| || | ||| || || ||||| || || || ||| | || ||||| | Sbjct 316021 AACCTTGGGACGA-TCA--AGTGCTCGAACCTGTGCACTGAAATTGTCGAGTACACGTCG 316077 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGAT 364326 || || ||||| |||||||| ||||| || || |||||||| ||| || || | | | Sbjct 316078 CCGGAGGAGACGGCCGTATGCAACCTCGCCTCCATCGCGCTGCCGCGCTTCGTCGACGTT 316137 Query 364327 G------GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAAT 364380 | | || ||||||||| ||| || | ||| || | || || |||| Sbjct 316138 GAAAAGCGCGAGTTCAACCACCAGCTTCTCTACGCCGTGACGAAGCAGATCACGCGCAAC 316197 Query 364381 CTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGA-AGCCGAGCGTTCTAATAT 364439 || || ||||| ||| || || || || | || || ||| || || || Sbjct 316198 CTAAACCGTGTTATTGACCGCAACTACTA-CCCAGTCGAGACAGCGCGCCGCAGCAACAT 316256 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 ||| | || || || ||||||||||||||||||||||||||| ||| || |||| Sbjct 316257 GCGCAACCGTCCCATCGGTCTTGGTGTACAGGGCCTCGCTGACACCTTT---ATCCTCAT 316313 Query 364500 G---ATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | || | || | ||| | || || | | ||| ||||||||| || || || Sbjct 316314 GCGACTGCCGTTCGTCTCGGCGGAGGCGCAGCGGGTGAATGCGGAGATCTTCGAGACCAT 316373 Query 364557 GTATTTTGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTA 364615 || || ||||| | || | | ||| || | ||||| ||||| |||| | Sbjct 316374 CTACTTCGCCGCGGTCGAGT-CGTCGATGGAGCTCGCAAAGGAGGAGGGACCGTACAAGA 316432 Query 364616 CTTATGAGG-GGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 | | ||| ||| | || |||| | | ||||| ||| | ||||| | || Sbjct 316433 CCTTCAAGGACAGCCCGGCAAGCG-AGGGCATTCTGCAGTTCGATATGTGGAAGAACGCG 316491 Query 364675 C-------CATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGG 364727 | || | || || ||| |||||| | || || || | | || || Sbjct 316492 CGGCCGAACAGCGGT-CGCTGGGACTGGGCCAGCCTCAAAGAGAAGGTCATGCAGGTAGG 316550 Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 | |||||||| || | | |||||||| || || || || | ||||| ||||| Sbjct 316551 CATACGCAACTCACTGCTGGTGTCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGG 316610 Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 ||||||||||| |||||||| || || ||| | || ||||| || || ||| Sbjct 316611 CAACAACGAGTGTTTCGAACCCTTCACCTCGAATATATACGTCCGCCGTGTGCTGAGCGG 316670 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || || || || || |||||||| |||| ||| || || || || |||||| Sbjct 316671 CGAGTTCCCTGTGGTGAACAAGTACCTCGTCATGGACCTCATCGCGCGTGGCCTGTGGAA 316730 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 ||| ||| ||| | |||||| | |||||||| | | |||||| || | Sbjct 316731 TGAGCAAATGCGCAACGAAATCATCTCTTACAATGGTTCGATCCTCAACATTGACGGCAT 316790 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 ||||| || || ||| ||||| ||||| ||||| || | ||| | | || Sbjct 316791 CCCAGATGACCTAAAGGAGCTTTACCGGACCGTGTGGGAGATCCCGCAGCGCAAGTTGAT 316850 Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCAT 365087 || ||||| ||| ||||| | ||| ||| ||| || | ||| | || | Sbjct 316851 CGACATGGCACGCGACCGCGGCCAATACATCGACCAGTCCCAATCACTGAACCTCTTTCT 316910 Query 365088 GACTCAG---CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 |||| || ||||| | | || | || ||||||| |||||||| ||| | | || Sbjct 316911 ---TCAGAGCCCCACCTCTGGCCAGATCACGTCCATGCTCTTCTACGGCTGGGAGGCTGG 316967 Query 365145 TCTTAAGACAGGTG 365158 || ||||| |||| Sbjct 316968 ACTGAAGACTGGTG 316981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353015527370