Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq28 143 3e-29 >seq28 Length=1152636 Score = 143 bits (158), Expect = 3e-29 Identities = 555/859 (65%), Gaps = 25/859 (3%) Strand=Plus/Minus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || || ||||| || || || || || || | ||||| ||| |||||||| | | Sbjct 316121 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 316062 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 ||||| || |||| || || | ||| || || || | |||||| || |||||||| || Sbjct 316061 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 316002 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || || ||||||||||| || ||| ||||| |||||||| | || |||| || || Sbjct 316001 TTGCATGCATCCTTGTACAGGATGAATGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 315942 Query 114644 GCCTTCCAGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 || ||| || | | ||| |||| | || | | || || ||| ||||||| Sbjct 315941 GCAAACCACACCTCCTGCGCCTGG-ATCGTCTTGACACCGCGGCCTTCCGCCTCGTAGCG 315883 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGC---CTCTGAGAGCCCTGGTGCCTTATC 114759 |||||| || ||| | || ||| ||| | ||||| |||| || | | | Sbjct 315882 CTCGTAGAGCCGCTCGAACGCCTC-GCCATGGCAGTCGCTGAG-GCCC-GGGCACGTGTT 315826 Query 114760 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGAT 114819 ||| | || | ||| | || | | |||||||||||||| | ||| ||||| Sbjct 315825 AGGGTCCATCAGCGTCCACCGCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGAT 315766 Query 114820 CCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGACGC 114877 ||| | || ||||||| || || ||| ||| || || | ||| ||| | | Sbjct 315765 CCACAACGCGTAGAAGAGGTCACG--GGCGCGCTGGTCATCCTTGCCCGTGTTGCGCTTC 315708 Query 114878 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 114937 | | || || | | || ||| || ||||| || || || || || |||| | ||| Sbjct 315707 AGCAACAGGAAACCAAAGACATCGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGCCC 315648 Query 114938 TTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994 || || || || |||||| ||| || | || ||| || || ||||| |||||| Sbjct 315647 TTGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATT 315588 Query 114995 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACT--TATTGGCTCTGA 115052 || | || || | || ||| || || || ||| | || ||| | || Sbjct 315587 GGTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGCAAT--GTAGCTGCCGGCGGCGCGGA 315530 Query 115053 CATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 115112 | || | |||| |||||| || || ||| ||| ||| ||||||||| | | Sbjct 315529 TGTTGTGCACATGCAGACCAATGCCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTCA 315470 Query 115113 GACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC---AGCTCG 115169 | | ||||||| |||||||| ||| |||| || | ||||||| |||| Sbjct 315469 GCGTATCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCT-- 315412 Query 115170 ACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 115229 |||||| ||| | || || |||||||||||||||||||| || |||||| |||| | | Sbjct 315411 -CATTTGCGGCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTGGCGTGGGTGAAAAAGC 315353 Query 115230 CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 115289 | |||||| || ||| ||||| ||| | | ||| ||||| || || | Sbjct 315352 CCATCGACATCAGATTGTACGTCTCACGCACGTTGTTGAGATCTCTGCCGTGGATGCCAA 315293 Query 115290 TCGAGACCCGCATAAACAT 115308 | ||| ||||||||||| Sbjct 315292 GGGCGACACGCATAAACAT 315274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353338657800