Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq28 150 2e-31 >seq28 Length=1152636 Score = 150 bits (166), Expect = 2e-31 Identities = 523/804 (65%), Gaps = 23/804 (3%) Strand=Plus/Minus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || || ||||| || || || || || || | ||||| ||| |||||||| | | Sbjct 316121 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 316062 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 ||||| || |||| || || | ||| || || || | |||||| || |||||||| || Sbjct 316061 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 316002 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||||| || || ||||| |||||||| | || |||| || || Sbjct 316001 TTGCATGCATCCTTGTACAGGATGAATGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 315942 Query 116605 GCCTTCCATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || ||| || | | ||| |||| | || | | || || ||| ||||||| Sbjct 315941 GCAAACCACACCTCCTGCGCCTGG-ATCGTCTTGACACCGCGGCCTTCCGCCTCGTAGCG 315883 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCT 116721 |||||| ||| ||| | || || ||| | ||||| |||| || | | | Sbjct 315882 CTCGTAGAGCCGCTCGAACGCCTCGCCATGGCAGTCGCTGAG-GCCCGGGCACGTGTTAG 315824 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || | | || | ||| | || | | || ||||||||||| | ||| |||||| Sbjct 315823 GGTC-CATCAGCGTCCACCGCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGATC 315765 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGACGCA 116839 || | ||| ||||||| || || ||| ||| || || | ||| ||| | || Sbjct 315764 CACAACGCGTAGAAGAGGTCACG--GGCGCGCTGGTCATCCTTGCCCGTGTTGCGCTTCA 315707 Query 116840 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCT 116899 | || || | | || ||| || ||||| || || || || || |||| | |||| Sbjct 315706 GCAACAGGAAACCAAAGACATCGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGCCCT 315647 Query 116900 TGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTG 116956 |||| || || |||||| ||| || | || || ||| || ||||| ||||||| Sbjct 315646 TGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATTG 315587 Query 116957 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACT--TGTTGGCTCTGAC 117014 | | || || | || ||| || || || ||| | || | ||| | || Sbjct 315586 GTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGCAAT--GTAGCTGCCGGCGGCGCGGAT 315529 Query 117015 ATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074 | ||| | |||| |||||| || || ||| ||| ||| ||||||||| | || Sbjct 315528 GTTGTGCACATGCAGACCAATGCCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTCAG 315469 Query 117075 ACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC---AGCTCGA 117131 | ||||||| || ||||| ||| |||| || | ||||||| |||| Sbjct 315468 CGTATCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCT--- 315412 Query 117132 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC 117191 |||||| ||| | || || |||||||||||||||||||| || |||||| |||| | || Sbjct 315411 CATTTGCGGCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTGGCGTGGGTGAAAAAGCC 315352 Query 117192 TTGGGACATCTTATCGTAGGTCTC 117215 |||||| || ||| ||||| Sbjct 315351 CATCGACATCAGATTGTACGTCTC 315328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506931590600