Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq22 104 3e-17 seq27 98.7 1e-15 >seq22 Length=644210 Score = 104 bits (114), Expect = 3e-17 Identities = 169/243 (70%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 |||||| || ||| | | || ||||| || | ||||| || || ||||| ||||| Sbjct 486225 GAGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCATGCATCCAGAAGAAGGCGGAG 486166 Query 102138 TGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTT 102197 ||||| || |||| ||| | | || | ||| ||||| || ||| ||| Sbjct 486165 TGGGCCGTGCGGTGGATTGGGAGCAGCGCGAG---CTTCCAGGAGCGGCTGATCGGCTTT 486109 Query 102198 GCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAG 102257 || || ||||| |||||||| || || ||||||||||| | | ||||| |||||| Sbjct 486108 GCCGCAGTGGAGGGCATCTTCTTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAG 486049 Query 102258 CGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTC 102317 || ||||| ||||| || | ||| ||||||||| ||||| || |||||||| || Sbjct 486048 CGCGGTCTGATGCCGGGATTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTA 485989 Query 102318 CAC 102320 ||| Sbjct 485988 CAC 485986 >seq27 Length=1043456 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 |||||| || ||| | | || ||||| || | ||||| || || ||||| ||||| Sbjct 845822 GAGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCATGCATCCAGAAGAAGGCGGAG 845763 Query 102138 TGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTT 102197 ||||| || |||| ||| | | || | ||| ||||| || ||| ||| Sbjct 845762 TGGGCCGTGCGGTGGATTGGGAGCAGCGCGAG---CTTCCAGGAGCGGCTGATCGGCTTT 845706 Query 102198 GCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAG 102257 || || ||||| ||||||| || || ||||||||||| | | ||||| |||||| Sbjct 845705 GCCGCAGTGGAGGGCGTCTTCTTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAG 845646 Query 102258 CGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTC 102317 || ||||| ||||| || | ||| ||||||||| ||||| || |||||||| || Sbjct 845645 CGCGGTCTGATGCCGGGGTTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTA 845586 Query 102318 CAC 102320 ||| Sbjct 845585 CAC 845583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742128425200