Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq33 84.2 3e-11 >seq33 Length=1414953 Score = 84.2 bits (92), Expect = 3e-11 Identities = 175/255 (69%), Gaps = 8/255 (3%) Strand=Plus/Plus Query 136687 TCCACGAGGTCCTTCTGGGCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATT 136746 || |||||||| | ||| || ||| ||| ||||| ||| |||||| || || | Sbjct 198047 TCTACGAGGTCGTCCTGAGCAGCCAGGACAGCGTCAATGCTCTTGTAAGCGGCGGGTGTC 198106 Query 136747 TCGTCGATCACGCCAGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCC 136806 ||||| | ||||| ||| ||||||||||| | |||| || || | |||||| Sbjct 198107 TCGTCCAGTACGCCGATGTCTTTGCGGCACTCGATGCCCAGAGTAGCAGTTTCATGGTCC 198166 Query 136807 TCCAGGGTGAA-GGTCGCCTTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTG 136862 |||| ||||| | || | |||| | ||||| | | || ||| || || ||||| Sbjct 198167 GCCAGAGTGAACCGCCGGC-GCGCCTCG--CCGCGGCTGTAGCG-CCGCCCAGCACCGTG 198222 Query 136863 CGAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCC 136922 |||||| |||||| | |||| |||||||| || || || |||||| |||||| Sbjct 198223 CGAGCAGGAGCAGTAGCTTGCCGCGTTGCCCTTTCCTCGTACAATGTAGCTGCAGGCCCC 198282 Query 136923 CATCGAGCCGGGGAT 136937 ||| || || || || Sbjct 198283 CATGGACCCAGGAAT 198297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690143698062000