Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 5e-13 >seq33 Length=1414953 Score = 87.8 bits (96), Expect = 5e-13 Identities = 228/346 (66%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 37172 TTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTCGA 37231 |||| ||||| || ||| | || || ||| || || | | | || ||||| || | Sbjct 198344 TTACTCGCAAGGGCGCTACTTCTGCGCGTATGGGTGAACTCGCCGTGATTCCTGGGTCCA 198285 Query 37232 TGGGTGC--GAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTG 37289 |||| || | || | ||| || || || ||||| || | | | | |||||| || Sbjct 198284 TGGGGGCCTGCAGCTA--CATTGTACGAGGAAAGGGCAACGCGGCAAGCTACTGCTCCTG 198227 Query 37290 CAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGA 37349 | |||||||| || || ||||| | ||| || || |||||||| | | Sbjct 198226 CTCGCACGGTGCTGGGCGGCGCTACAGCCGCGGCGAGGCGCGCCGGCGGTTCACTCTGGC 198167 Query 37350 GGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGA 37409 ||| ||||| | || || || ||||||||||||||||| || || | ||||| Sbjct 198166 GGACCATGAAACTGCTACTCTGGGCATCGAGTGCCGCAAAGACATCGGCGTACTGGACGA 198107 Query 37410 GACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 ||| || || ||||||||| ||| || || ||| |||| || || || ||| || || Sbjct 198106 GACACCCGCCGCTTACAAGAGCATTGACGCTGTCCTGGCTGCTCAGGACGACCTCGTAGA 198047 Query 37470 CATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGAGGA 37515 | || | | |||| ||||| | || ||||| || |||||| Sbjct 198046 GGTGGTCACCGAGTTGCGGCAAGTGCTATGTGTGAAAGGGTGAGGA 198001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139283142110420