Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq22 114 1e-20 seq28 87.8 2e-12 >seq22 Length=644210 Score = 114 bits (126), Expect = 1e-20 Identities = 244/359 (68%), Gaps = 4/359 (1%) Strand=Plus/Minus Query 50370 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50429 ||||| || | ||||| ||||||||| | || ||||||||||| || | ||||| ||| Sbjct 486039 ATGCCGGGATTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGAC 485980 Query 50430 TTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTG 50489 || |||||| || ||||| ||| | | || | ||| | | ||| | || Sbjct 485979 TTCGCGTGTCTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGCGTGCTG 485920 Query 50490 GACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTG 50549 || || | || || || |||||||| ||||| || ||||| | || ||| Sbjct 485919 GAGATCATTGTGGATGCGGTGAACATCGAACGCGAGTTCATCTGTGACGCGCTTCCGGTG 485860 Query 50550 GCATTGTTGGGCATGAACGCAGACATGATGTGCG-AGTACATTGAGTTTGTTGCAGACAG 50608 || | |||||||| || || ||||| ||| ||||||||||||| || || ||| | Sbjct 485859 CGGCTGATTGGCATGAATGCTGAGCTGATG-GCGCAGTACATTGAGTTCGTCGCGGACCG 485801 Query 50609 ATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTAT 50668 || | || |||||| | ||| |||| || ||| | | |||||| || || Sbjct 485800 GCTGCTTGTGTCGCTGGGCGAGGAGAAGCACTACAACGCAACTCAGCCCTTTGACTTCAT 485741 Query 50669 GAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGACGTGTAGGCGAATAC 50726 | | | || ||| || |||||||||||||||| ||||| |||| | || ||||| ||| Sbjct 485740 GGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGAAGAAG-GTGGGCGAGTAC 485683 >seq28 Length=1152636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 215/323 (67%), Gaps = 5/323 (2%) Strand=Plus/Minus Query 151717 ATGCCACGGTTCAACGTACACTGCTTGGGCGCCTTTTCGCTT---GCCACCTTGATCCAC 151773 |||||| || || | || || || |||||| || ||||| ||| || || || || Sbjct 315681 ATGCCAGGGCTCGAGATAGACGGCGAAGGCGCCCTTGCGCTTACCGCCGCCCTGGTCTAC 315622 Query 151774 GTGACGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTT 151833 || || | | || || || || ||||||||||||| |||||| | | |||||||| Sbjct 315621 GTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATTGGTACGAGTCCGTTCGACGTGCCGTT 315562 Query 151834 CGTAGATTTTATTTTGCTGTTGCGGCCGCGTACGCTGTTCACGTTCAATCCAATACCGCC 151893 || || | |||| | | |||| | | ||| ||| | || ||||| ||||| Sbjct 315561 GGTTCCAGCAATGTAGCTGCCGGCGGCGCGGATGTTGTGCACATGCAGACCAATGCCGCC 315502 Query 151894 GCCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATC 151953 | | || ||||| |||||| || || | || | ||||||||| ||||| || Sbjct 315501 GGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTATCGTAGATGCCGTCGATGCTGTC 315442 Query 151954 G-CTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGTGTCAGAGTGCCGGCAGCGA 152012 | | ||| | | || || || || || ||||| ||||| || | ||||| || || Sbjct 315441 GTCCTTCGA-CGCCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGCCAGCGTTGA 315383 Query 152013 ACATGGTTGGGCTTGCGTGCGTG 152035 | | |||||| | ||||| ||| Sbjct 315382 AGAGGGTTGGAGTGGCGTGGGTG 315360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543786262000