Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq31 102 5e-17 >seq31 Length=1340778 Score = 102 bits (112), Expect = 5e-17 Identities = 159/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| || ||||| ||||| | || || Sbjct 825919 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCCTC 825978 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || |||||||| |||| |||||||| || |||| | || || ||||| Sbjct 825979 CAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 826038 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 826039 GATCTTGGCCTTCA-CGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGCGCGATCGTCT 826097 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGT--TGGTGTGT 33760 | || || | ||| || || ||||||||||| || |||||||| Sbjct 826098 TGCCGGTCAGCGTCTTCACGAAGATCTGCATGGTGATGGTGTGT 826141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703859787200