Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6 201 1e-46 >seq6 Length=511626 Score = 201 bits (222), Expect = 1e-46 Identities = 432/633 (68%), Gaps = 26/633 (4%) Strand=Plus/Minus Query 146884 GGGAAGG-GTCGGGGGTTC-CTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGT 146941 ||||||| || ||||||| || | ||||| | |||||| | || | ||||||| ||| Sbjct 362936 GGGAAGGCGTTCGGGGTTCGCTCG--AGCTGCACTTTCAGAGCATCGATGTGGTTGCGGT 362879 Query 146942 AGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGG 147001 |||| || ||||| || || |||||||| | ||||| ||| || || || | | | Sbjct 362878 AGACATGGGCGTCGCCGAGCGTGTGCACGAGTTCCCCAGGCCGCAGACCCGTGGCTTTTG 362819 Query 147002 CCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGT 147061 ||| | | ||||||||||| |||| ||| |||||||||||||| || || ||||||| Sbjct 362818 CCATAAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGCCCCATGT 362759 Query 147062 CCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC---CCCGTC---GGCCACGTAAAACT 147115 | | ||| | |||||||||| ||| || ||||| | |||| | |||||| |||| Sbjct 362758 CGCACGAGCGCTGGTACAGCATGCAGGACAGCTCCTTCGCGTCCGTGTTCACGTAGAACT 362699 Query 147116 G-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG---GGGTTCCAG 147171 | ||| || | ||| || |||||||||||||| || |||| |||| ||||||||| Sbjct 362698 GAGCA-AGCAAGTGACAGGGCGGCAGCGCCATCTCGTGCAG---CGCGCATGGGTTCCAG 362643 Query 147172 GCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAA---TCTCTTCGATAACCCAC 147228 || | | || || || | | | |||||| ||| | |||| |||| | Sbjct 362642 GCAGTTAACAGGAGGCGGCGGTCGTTTGGGTTCACCTTGATGGTCTCCACGAT---GGAT 362586 Query 147229 CTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCA 147288 | | ||||||||| || | ||| |||| || | | | | || |||| || || Sbjct 362585 TTGATCTGGTCCACCCCTTCGCCATCGTAATTCGCCTCAAACCCCTTGTACTGTGCTCCG 362526 Query 147289 AAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAG 147348 ||||| | ||||||||| ||||| || || || || || ||| | || ||| Sbjct 362525 AAGTGGCGCCACTGGAATCCGTAGACAGGACCGAGATCCATCTCCTTATTCGCCGTCAAG 362466 Query 147349 CC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGC 147407 || || | | | |||||||||| | || |||| | ||||||||| | ||||| | Sbjct 362465 CCGCGGCTG-TCGAGAAACTCGCGCGAGCCGTTACCATCCCAGATGTGAATGTCCTTGTC 362407 Query 147408 GGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCC 147467 | ||| || | || || ||| || | |||||| ||||||||||| | || || Sbjct 362406 CGCCAGCAACTGGGCGTTTGTTTCGCCGCGCAGGAACCACAGCAGCTCCTCGCACACGCC 362347 Query 147468 CCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | ||| || || | ||| || |||| ||| || Sbjct 362346 GCGCCAGAAAACGCGCTTCGTTGTCAACAGCGG 362314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487744724000