Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq31 105 7e-18 seq28 104 2e-17 >seq31 Length=1340778 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| |||||||| ||||| || ||||||||||| | ||| | Sbjct 825911 AGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 825970 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| ||||| |||| |||||||| || ||||| ||||| || Sbjct 825971 CCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 826030 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| ||||| | Sbjct 826031 TTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGCGCG 826090 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 826091 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 826128 >seq28 Length=1152636 Score = 104 bits (114), Expect = 2e-17 Identities = 172/248 (69%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 7735 GAAGACAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATAC 7794 || ||||||||||||||||| ||| | |||||| || |||||| || ||| Sbjct 315439 GACGACAGCATCGACGGCATCTACGATACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCG 315498 Query 7795 GGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCC 7854 | |||||| || |||||| | || || || | |||||| ||| ||| ||| | Sbjct 315499 GCCGGCGGCATTGGTCTGCATGTGCACAACATCCGCGCCGCCGGCAGCTACATTGCTGGA 315558 Query 7855 ACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGA 7914 |||||||| | | | ||| | | || ||| ||||||| ||||| ||| | | || Sbjct 315559 ACCAACGGCACGTCGAACGGACTCGTACCAATGCTGCGCGTCTTCAACAACACTGCCCGC 315618 Query 7915 CATGTAGACCAG---GGGGGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGG 7971 | ||||||||| || || |||||||| |||||| ||| ||||| | ||||| ||| Sbjct 315619 TACGTAGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCTCGAGCCCTGG 315678 Query 7972 CACGCGGA 7979 || || || Sbjct 315679 CATGCCGA 315686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398178888200