Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq28 138 1e-27 >seq28 Length=1152636 Score = 138 bits (152), Expect = 1e-27 Identities = 554/859 (64%), Gaps = 25/859 (3%) Strand=Plus/Minus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || ||||| || || || || || || | ||||| ||| |||||||| | | Sbjct 316121 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 316062 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| ||||||| ||| || | ||| || || || | |||||| || |||||||| || Sbjct 316061 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 316002 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||| || ||| ||||| |||||||| | || |||| || || Sbjct 316001 TTGCATGCATCCTTGTACAGGATGAATGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 315942 Query 118884 GCCTTCCAGACAT-CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || ||| || | | || |||| | || | | || || || ||||||| Sbjct 315941 GCAAACCACACCTCCTGCGCCTGG-ATCGTCTTGACACCGCGGCCTTCCGCCTCGTAGCG 315883 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGC---CTCTGAGAGCCCTGGTGCCTTATC 118999 |||||| || ||| | || ||| ||| | ||||| |||| || | | | Sbjct 315882 CTCGTAGAGCCGCTCGAACGCCTC-GCCATGGCAGTCGCTGAG-GCCC-GGGCACGTGTT 315826 Query 119000 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059 ||| | || | ||| | || | | || ||||||||||| | ||| ||||| Sbjct 315825 AGGGTCCATCAGCGTCCACCGCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGAT 315766 Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGACGC 119117 ||| | ||| ||||||| || || ||| ||| || || | ||| ||| | | Sbjct 315765 CCACAACGCGTAGAAGAGGTCACG--GGCGCGCTGGTCATCCTTGCCCGTGTTGCGCTTC 315708 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | | || || | | || ||| || ||||| || || || || || |||| | ||| Sbjct 315707 AGCAACAGGAAACCAAAGACATCGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGCCC 315648 Query 119178 TTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234 || || || || |||||| ||| || | |||||| ||| || || || |||||| Sbjct 315647 TTGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATT 315588 Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT--TATTGGCTCTGA 119292 || | || || | || ||| || || || ||| | || ||| | || Sbjct 315587 GGTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGCAAT--GTAGCTGCCGGCGGCGCGGA 315530 Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352 | ||| | |||| |||||| || || ||| ||| ||| ||||||||| | | Sbjct 315529 TGTTGTGCACATGCAGACCAATGCCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTCA 315470 Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC---AGCTCG 119409 | | ||||||| || ||||| ||| |||| || | ||||||| |||| Sbjct 315469 GCGTATCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCT-- 315412 Query 119410 ACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC 119469 |||||| ||| | || || |||||||||||||| ||||| || |||||| |||| | | Sbjct 315411 -CATTTGCGGCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTGGCGTGGGTGAAAAAGC 315353 Query 119470 CTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 119529 | |||||| | ||| ||||| ||| | | ||| ||||| || || | Sbjct 315352 CCATCGACATCAGATTGTACGTCTCACGCACGTTGTTGAGATCTCTGCCGTGGATGCCAA 315293 Query 119530 TCGAGACCCGCATAAACAT 119548 | ||| ||||||||||| Sbjct 315292 GGGCGACACGCATAAACAT 315274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434929434600