Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20panamensis_20[genbank_20GCA_5F000755165.1_202014-09-16] 35 sequences; 30,688,794 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq31 131 4e-25 >seq31 Length=1340778 Score = 131 bits (144), Expect = 4e-25 Identities = 155/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || |||||| | ||||||||||| ||| Sbjct 826125 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTCGAGGTGGAGGCGAGC--- 826069 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct 826068 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 826009 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| ||||| || ||||| || || || | || || | || || ||| Sbjct 826008 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTACAAC 825949 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 825948 ATCCAGAAGGAGTCCACGCTGCACCTGGT 825920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730660201790