Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq17 111 3e-19 seq22 102 2e-16 >seq17 Length=659812 Score = 111 bits (122), Expect = 3e-19 Identities = 286/428 (67%), Gaps = 11/428 (3%) Strand=Plus/Minus Query 230218 TTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCT- 230276 |||||||| |||||||| | || |||||| ||| ||| ||||||| || | Sbjct 495084 TTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGGTTG 495025 Query 230277 -CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAG- 230334 || || | |||||| ||||| ||||||||||| || || | |||| || | Sbjct 495024 ACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCG-CGTGT 494968 Query 230335 CTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATT 230391 || |||| || | || || |||| || || |||| || | |||||| Sbjct 494967 CTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGCGTGCTGGAGATCATT 494908 Query 230392 ACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCC-ATGTCGCCTTAT 230450 || || || | | |||| |||||||| || ||||| |||| ||| || || || Sbjct 494907 GTGGATGCGGTGAACATCGAACGCGAGTTCATCTGCGACGCGCTTCCGATG-CGGCTGAT 494849 Query 230451 TGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGT 230510 ||||||||| || || || |||| |||||||| || ||||| || ||||| | |||| Sbjct 494848 TGGCATGAATGCCGAGCTGATGGCGCAGTACATTGAGTTCGTCGCGGACCGGCTGCTTGT 494789 Query 230511 TGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCAT 230570 | || || | ||||| |||||| | | | ||||||| || |||||| | || Sbjct 494788 GTCGCTGGGCGAGGAGAAGCACTACAACGCGACTCAGCCCTTTGACTTCATGGAGATGAT 494729 Query 230571 TTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGG 230630 ||||| || || || || |||||||| || ||| || | || || |||| | | || Sbjct 494728 CTCGCTGCAGGGCAAAACGAACTTCTTTGAGAAGAAGGTGGGCGAGTACCAGAAGGCCGG 494669 Query 230631 TGTGATGA 230638 ||||||| Sbjct 494668 CGTGATGA 494661 >seq22 Length=1192232 Score = 102 bits (112), Expect = 2e-16 Identities = 282/427 (66%), Gaps = 9/427 (2%) Strand=Plus/Minus Query 230218 TTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCT- 230276 |||||||| |||||||| | || |||||| ||| ||| ||||||| || | Sbjct 920707 TTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGGTTG 920648 Query 230277 -CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAG- 230334 || || | |||||| ||||| ||||||||||| || || | |||| || | Sbjct 920647 ACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCG-CGTGT 920591 Query 230335 CTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATT 230391 || |||| || | || || |||| || || |||| || | |||||| Sbjct 920590 CTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGTGTGCTGGAGATCATT 920531 Query 230392 ACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT 230451 || || || | | |||| |||||||| || ||||| |||| || || ||| Sbjct 920530 GTGGATGCGGTGAACATCGAACGCGAGTTCATCTGCGACGCGCTTCCGGTGCGGCTGATT 920471 Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 |||||||| || || || |||| |||||||| || ||||| || ||||| | |||| Sbjct 920470 GGCATGAATGCCGAGCTGATGGCGCAGTACATTGAGTTCGTCGCGGACCGGCTGCTTGTG 920411 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 | || || | ||||| |||||| | | | ||||||| || |||||| | || Sbjct 920410 TCGCTGGGCGAGGAGAAGCACTACAACGCGACTCAGCCCTTTGACTTCATGGAGATGATC 920351 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 ||||| || || || || |||||||| || | | || | || || |||| | | || Sbjct 920350 TCGCTGCAGGGCAAAACGAACTTCTTTGAGAGGAAGGTGGGCGAGTACCAGAAGGCCGGC 920291 Query 230632 GTGATGA 230638 ||||||| Sbjct 920290 GTGATGA 920284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823498525310