Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 3e-14 >seq17 Length=659812 Score = 95.1 bits (104), Expect = 3e-14 Identities = 357/545 (66%), Gaps = 24/545 (4%) Strand=Plus/Plus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| ||| ||||||| |||| | |||||||| ||||| || || ||||| || Sbjct 494666 ACGCCGGCCTTCTGGTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTTTTGCCCTGCAGC 494725 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGG-CGCAGTTGTACACCTTGTCGTACCCCAG 157362 || ||||| ||||| | || || || | | ||| |||||| ||| || | ||||| Sbjct 494726 GAGATCATCTCCATGAAGTCAAAGGGCTGAGTCGC-GTTGTAGTGCTTCTCCTCGCCCAG 494784 Query 157363 CTGGTTCAGCCAGTAG-TCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGA 157421 | | || ||| | ||||| || |||| ||||||| | ||| || | | | Sbjct 494785 C-GACACAAGCAGCCGGTCCGCGACGAACTCAATGTACTGCGCCATCAGCTCGGCATTCA 494843 Query 157422 TACCGATGAGCGCGACGGGAAGCGCCGACGAA-ATGAATTCGCACTCAACGCTAACAGCG 157480 | || || ||| | |||||||| | || | ||||| |||| || | | | || || Sbjct 494844 TGCCAATCAGCCGCATCGGAAGCGC-GTCGCAGATGAACTCGCGTTCGATGTTCACCGCA 494902 Query 157481 TGCTTGAAAATTTCATGAACTCTCTCCCGCGGCAGCCTATTCTTGAGATGC---TTGTAG 157537 | | | || || | || | ||| |||||||| | | ||||| ||| ||||| Sbjct 494903 TCCACAATGATCTCCAGCACGCGCTCGCGCGGCAGTTTGTGCTTGATGTGCGAGTTGTAC 494962 Query 157538 ATGAGA-ACG-GAAG-CCGTGGCGTGAAGTCCTTCGTCTCTGGCGATGAGAGAGTTCGCG 157594 | ||| ||| |||| ||||| || || || ||||| | | |||||| ||| | Sbjct 494963 AGCAGACACGCGAAGTCCGTG---TGTAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTG 495019 Query 157595 AACGACAAACCCTTGAACTTCTGCCGCTTCTTCAGCCAGTAGATGGCGCAGAACGACCCA 157654 |||| ||| ||| | | ||||||||||||||| | | |||||||| || || Sbjct 495020 AACGTCAACCCCGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAAGGATCCG 495079 Query 157655 CTGAACTGCACGCCCTCCAGACAGGTGAAGCCGACTAGCCTCTCCGCGAGTGAAGCGGTT 157714 || | |||||||| || ||||||| |||| |||| || ||| | Sbjct 495080 GAAAAGAAGATGCCCTCCACTGCGGCAAAGCCGATCAGCCGCTCCTGGA----AGC--TC 495133 Query 157715 TCGGGGTTC---ATCCACTTCTCTGCCCAGAGCGCCTTCTTTTCGATGATTGGCATCGTC 157771 || | || |||||| | | ||||| ||||||||| | |||| ||| |||||| Sbjct 495134 GCGCTGCTCCCAATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCATGGGATCGTC 495193 Query 157772 TGGAT 157776 ||||| Sbjct 495194 TGGAT 495198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765890967616