Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq34 145 7e-30 >seq34 Length=527293 Score = 145 bits (160), Expect = 7e-30 Identities = 291/422 (69%), Gaps = 22/422 (5%) Strand=Plus/Minus Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCC 20983 ||| | ||| | ||||||| ||| || |||||||| || | |||||||| | || || Sbjct 366352 CAGAGCATCGATGTGGTTGCGGTAGACATGGGCGTCGCCGAGCGTGTGCACGAGTTCGCC 366293 Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043 || ||| |||||| | | || || || || || || |||||| ||||||||| Sbjct 366292 AGGCCGCAGACCCGTGGCTTTTGCCATAAGGATGGTGAGCAGCGCGTAGGAGGCGATGTT 366233 Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTC--- 21100 || ||||| ||||| ||||||||| || | |||||||||| |||||||||||| Sbjct 366232 GAAGGGGACGCCGAGCCCCATGTCGCACGAGCGCTGGTACAGCATGCAGGACAGCTCCTT 366173 Query 21101 --CCCCCGAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC-CGCG 21156 | ||| | |||||| |||||| | | |||||| || || | |||||| || | Sbjct 366172 CGCGTCCGTGTTCACGTAGAACTGAGCAAGCAAGTGACAGGGCGGCAACGCCATCTCGTG 366113 Query 21157 CGAGGTCCGCG---GGGTTCCACGCGCACATAAC--GATGCGCCGATCG--TGGGGCCGC 21209 | || |||| |||||||| ||| |||| || ||| || ||| |||| | | Sbjct 366112 C-AG---CGCGCATGGGTTCCA--GGCAGTTAACAGGAGGCGGCGGTCGTTTGGGTTCAC 366059 Query 21210 CTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCG 21269 | || || ||||| | | | | |||||||||||| | || ||||| || || Sbjct 366058 C--TTGATGGTCTCCACGATGGATTTGATCTGGTCCACCCCTTCGCCATCGTAATTCGCC 366001 Query 21270 TCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGA 21329 || |||| |||||| || || || || | ||||||||| ||||| || || || ||| Sbjct 366000 TCAAACCCCTTGTACTGTGCTCCGAAGTGGCGCCACTGGAATCCGTAGACAGGGCCGAGA 365941 Query 21330 TC 21331 || Sbjct 365940 TC 365939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775807099760