Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq17 136 6e-27 seq22 129 9e-25 >seq17 Length=659812 Score = 136 bits (150), Expect = 6e-27 Identities = 578/890 (65%), Gaps = 40/890 (4%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 || || |||||| ||| || || || ||| | |||||| || || || | | Sbjct 495543 CTCTTCCCCATCCAGTACCACGATATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATC 495484 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 |||||||| || ||| |||| ||| ||| ||| || | || |||| | | | ||| Sbjct 495483 TGGACGGTAGAGGAGATCGACCTGGGCAACGACATGAAGGACTGGGTGGCGC---TGAAC 495427 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || || || | ||||| |||| | | |||||||| ||||| ||| || ||| Sbjct 495426 GACGGGGAACGGCACTTTATCAAGCACGTGCTTGCCTTCTTCGCCGGGAGCGACGGCATC 495367 Query 125175 GTCAACGACAATCTGTTGACA-CGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 ||| ||| ||||| | || || ||| || ||| | || |||| | || | Sbjct 495366 GTCGTCGAGAATCT-TGCCCAGCGTTTCATGAGCGACGTGAAGGTGCCGGAGGCG-CGCG 495309 Query 125234 CTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 | || ||||||||||| | ||||| |||||| | ||||| || | |||||| || Sbjct 495308 CGTTCTACGGATTCCAGCTGATGATGGAGAACATCCACTCAGAGACATACTCTGTGCTAC 495249 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACACG 125351 | |||| |||||| || | || | | || | ||| | |||| ||| | ||| Sbjct 495248 TGGACACGTACATCACAGA-CAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACG 495190 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCG--ATGACGACAAGT 125409 | || | || | || ||||| | |||| | |||||||| | | | | || Sbjct 495189 ATCCCATGCATCCAGAAGAAGGCGGAGTGGGCCGTGCGGTGGATTGGGAGCAGCGCGAG- 495131 Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-T 125468 |||| || | ||| | | || ||||| || ||||||||||||||||| || | Sbjct 495130 CTTCCAG----GAGCGGCTGATCGGCTTTGCCGCAGTGGAGGGCATCTTCTTTTCCGGAT 495075 Query 125469 AGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528 || |||| | | || ||||| ||||||||||| || ||||| || ||||| ||| Sbjct 495074 CCTTCTGCGCGC-TGTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGGTTGACGTTCAGC 495016 Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT----T 125584 |||||| | || || || ||||||||||||||| ||||| || ||| |||| Sbjct 495015 AACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCGCGTGTCTGCTGTACAAC 494956 Query 125585 TCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAAC 125644 ||||| ||| | | | ||| | | |||| | || || |||||| Sbjct 494955 TCGCA--CATC-AAGCACAAACTGCCGCGCGAGCG-CGTGCTGGAGAT---CATTGT--- 494906 Query 125645 CGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGG 125704 ||||| |||| || |||| ||||| | ||| | || ||| | | ||||||| Sbjct 494905 GGATGCGGTGAACATCGAACGCGAGTTCATCTGCGACGCGCTTCCGATGCGGCTGATTGG 494846 Query 125705 CATGAACTGCAAGCTAATGTGCG-AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACG 125763 |||||| | |||| ||| ||| ||||||| ||||| || || || || || || | Sbjct 494845 CATGAATGCCGAGCTGATG-GCGCAGTACATTGAGTTCGTCGCGGACCGGCTGCT---TG 494790 Query 125764 AGTTGATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820 || | | ||| ||| |||||||| | | |||||||| |||||| | | Sbjct 494789 TGTCGCTGGGCGAGGAGAAGCACTACAACGCGACTCAGCCCTTTGACTTCATGGAGATGA 494730 Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | || || |||| || || ||||| || ||||||||||| |||||||| Sbjct 494729 TCTCGCTGCAGGGCAAAACGAACTTCTTTGAGAAGAAGGTGGGCGAGTAC 494680 >seq22 Length=1192232 Score = 129 bits (142), Expect = 9e-25 Identities = 302/444 (68%), Gaps = 24/444 (5%) Strand=Plus/Minus Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || ||||| || ||||||||||||||||| || | || |||| | | || ||||| || Sbjct 920731 TTTGCCGCAGTGGAGGGCATCTTCTTTTCCGGATCCTTCTGCGCGC-TGTTCTGGCTGAA 920673 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 ||||||||| || ||||| || ||||| ||| |||||| | || || || |||||||| Sbjct 920672 GAAGCGCGGTCTGATGCCGGGGTTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGG 920613 Query 125555 CCTACACTGTGACTTTGCCATTCTACTGT----TTCGCAACTATCTGCGTCCCGAGTGCA 125610 ||||||| ||||| || ||| |||| ||||| ||| | | | ||| Sbjct 920612 CCTACACACGGACTTCGCGTGTCTGCTGTACAACTCGCA--CATC-AAGCACAAACTGCC 920556 Query 125611 GATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670 | | |||| || || || |||||| ||||| |||| || |||| |||| Sbjct 920555 GCGCGAGCG-TGTGCTGGAGAT---CATTGT---GGATGCGGTGAACATCGAACGCGAGT 920503 Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCG-AG 125729 | | ||| | || ||||| | ||||||||||||| | |||| ||| ||| || Sbjct 920502 TCATCTGCGACGCGCTTCCGGTGCGGCTGATTGGCATGAATGCCGAGCTGATG-GCGCAG 920444 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC---CGCAAGATTTAC 125786 ||||| ||||| || || || || || || | || | | ||| ||| ||| Sbjct 920443 TACATTGAGTTCGTCGCGGACCGGCTGCT---TGTGTCGCTGGGCGAGGAGAAGCACTAC 920387 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 ||||| | | |||||||| |||||| | || || || |||| || || ||||| Sbjct 920386 AACGCGACTCAGCCCTTTGACTTCATGGAGATGATCTCGCTGCAGGGCAAAACGAACTTC 920327 Query 125847 TTCGAGAAGAAGGTCAGCGAGTAC 125870 || |||| |||||| |||||||| Sbjct 920326 TTTGAGAGGAAGGTGGGCGAGTAC 920303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058857260120