Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq23 235 1e-56 >seq23 Length=1180511 Score = 235 bits (260), Expect = 1e-56 Identities = 1120/1754 (64%), Gaps = 62/1754 (4%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || || || ||||| ||||| |||||||| || |||| ||||| || ||| Sbjct 327164 ATTGTGGAGCGGCCTCAGCAGATGTTTATGCGTGTCGCCCTTGGCATCCACGGCAGAGAT 327223 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGC 363557 | | || | ||| || || || || || | | ||| | ||||| ||||| Sbjct 327224 CTCAACAACGTGCGTGAGACGTACAATCTGATGTCGATGGGCT----TTTTCACCCACGC 327279 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 || ||||| | | ||| ||||| || | || || || ||| || ||||| || | Sbjct 327280 TACTCCAACCCTCTTCAACGCTGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGT 327339 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 ||||||||| |||||| || |||| || || || ||| | || || | || Sbjct 327340 GGCGTCGAAGGACGACAGCATCGACGGCATCTACGATACGCTGAAGGAGTGCGCCGTGAT 327399 Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTA 363737 |||| || ||||| |||||| | | ||||| | || || ||| || Sbjct 327400 CAGCAAGGCGGCCGGCGGTATTGGTCTGCATGTGCACAACATCCGCGCCGCCGGCAGCTA 327459 Query 363738 CATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 |||| || || || ||||| || || || || ||||| || || || |||| Sbjct 327460 CATTGCTGGAACCAACGGCACGTCGAACGGACTCGTACCAATGCTGCGCGTCTTCAACAA 327519 Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857 ||||| | ||||| |||||||| || || |||||||| || || || || | ||||| Sbjct 327520 CACTGCCCGCTACGTAGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCT 327579 Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGA-GCTCCGGAAAAACACGGGAAAAG 363916 |||||| ||||||||| | |||| ||||| || ||| | ||||| ||||| | Sbjct 327580 CGAGCCCTGGCATGCCGATGTCTTTG-GTTTCCTGTTGCTGAAGCGCAACACAGGAAAGG 327638 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 | || ||| || ||||| || ||||| || | ||| | | ||| || ||||||| Sbjct 327639 ATGACCAGCGCGCCCGTGACCTCTTCTACGCGTTGTGGATCCCGGACTTGTTCATGAAGC 327698 Query 363977 GCGTGGAGGCAGGTAAGAATTGGTC-ACTCTTTTG--CCC--ACACGAATGTCCAGGTCT 364031 | || | | || || ||| || || || ||| ||||| || || || || Sbjct 327699 GTGTCAA---AAGTGAGGGGCGGTGGACGCTGATGGACCCTAACACG--TGCCCGGGCCT 327753 Query 364032 TTCCGA-TGT-ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGA 364089 ||| || |||| | | || | |||||| ||| || || |||| ||| Sbjct 327754 CAGCGACTGCCATGGCGAGGCGTTCGAGCGGCTCTA--CGAGCGCTACGAGGCGGAAGGA 327811 Query 364090 AAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATT 364149 | | ||||| || | || ||| || | |||||||||||| |||| || ||||| Sbjct 327812 CGCGGTGTCAAGACGATCCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCTCAGATC 327871 Query 364150 GAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 ||||| || || | || ||||||| ||| | |||||| ||||||| |||||| || Sbjct 327872 GAGACGGGCGGGCCGTTCATCCTGTACAAGGATGCATGCAACAGCAAGTCAAACCAGAAG 327931 Query 364210 CACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCT 364266 ||||||| || | ||| || || ||||| || || || ||| | || ||||| | Sbjct 327932 AACCTTGGGACGA-TCA--AGTGCTCGAACCTGTGCACTGAAATTGTCGAGTACACGTCG 327988 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGAT 364326 || || ||||| |||||||| ||||| || || |||||||| ||| || || | | | Sbjct 327989 CCGGAGGAGACGGCCGTATGCAACCTCGCCTCCATCGCGCTGCCGCGCTTCGTCGACGTT 328048 Query 364327 G------GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAAT 364380 | | || ||||||||| ||| || | ||| || | || || |||| Sbjct 328049 GAAAAGCGCGAGTTCAACCACCAGCTTCTCTACGCCGTGACGAAGCAGATCACGCGCAAC 328108 Query 364381 CTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGA-AGCCGAGCGTTCTAATAT 364439 || || ||||| ||| || || || || | || || ||| || || || Sbjct 328109 CTAAACCGTGTTATTGACCGCAACTACTA-CCCAGTCGAGACAGCGCGCCGCAGCAACAT 328167 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 ||| | || || || ||||||||||||||||||||||||||| ||| || |||| Sbjct 328168 GCGCAACCGTCCCATCGGTCTTGGTGTACAGGGCCTCGCTGACACCTTT---ATCCTCAT 328224 Query 364500 G---ATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | || | || | ||| | || || | | || ||||||||| || || || Sbjct 328225 GCGACTGCCGTTCGTCTCGGCGGAGGCGCAGCGGGTGAACGCGGAGATCTTCGAGACCAT 328284 Query 364557 GTATTTTGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTA 364615 || || ||||| | || | | ||| || | ||||| ||||| |||| | Sbjct 328285 CTACTTCGCCGCGGTCGAGT-CGTCGATGGAGCTCGCAAAGGAGGAGGGACCGTACGAGA 328343 Query 364616 CTTATGAGGG-GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 | | |||| ||| | || |||| | | ||||| ||| | ||||| | || Sbjct 328344 CCTTCAAGGGCAGCCCGGCAAGCG-AGGGCATTCTGCAGTTCGATATGTGGAAGAACGCG 328402 Query 364675 C-------CATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGG 364727 | || | || || ||| |||||| | || || || | | || || Sbjct 328403 CGGCCGAACAGCGGT-CGCTGGGACTGGGCCAGCCTCAAAGAGAAGGTCATGCAGGTAGG 328461 Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 | |||||||| || | | |||||||| || || || || | ||||| ||||| Sbjct 328462 CATACGCAACTCACTGCTGGTGTCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGG 328521 Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 ||||||||||| |||||||| || || ||| | || ||||| || || ||| Sbjct 328522 CAACAACGAGTGTTTCGAACCCTTCACCTCGAATATATACGTCCGCCGTGTGCTGAGCGG 328581 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || || || || || |||||||| |||| ||| || || || || |||||| Sbjct 328582 CGAGTTCCCTGTGGTGAACAAGTACCTCGTCATGGACCTCATCGCGCGTGGCCTGTGGAA 328641 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 ||| ||| ||| | |||||| | |||||||| | | |||||| || | Sbjct 328642 TGAGCAAATGCGCAACGAAATCATCTCTTACAATGGTTCGATCCTCAACATTGACGGCAT 328701 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 ||||| || || ||| ||||| ||||| ||||| || | ||| | | || Sbjct 328702 CCCAGATGACCTAAAGGAGCTTTACCGGACCGTGTGGGAGATCCCGCAGCGCAAGTTGAT 328761 Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCAT 365087 || ||||| ||| ||||| | ||| ||| ||| || | ||| | || | Sbjct 328762 CGACATGGCACGCGACCGCGGCCAATACATCGACCAGTCCCAATCACTGAACCTCTTTCT 328821 Query 365088 GACTCAG---CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 |||| || ||||| | | || | || ||||||| |||||||| ||| | | || Sbjct 328822 ---TCAGAGCCCCACCTCTGGCCAGATCACGTCCATGCTCTTCTACGGCTGGGAGGCTGG 328878 Query 365145 TCTTAAGACAGGTG 365158 || ||||| |||| Sbjct 328879 ACTGAAGACTGGTG 328892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352982128934