Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq22 123 5e-23 seq17 123 5e-23 seq23 102 2e-16 >seq22 Length=1192232 Score = 123 bits (136), Expect = 5e-23 Identities = 265/390 (68%), Gaps = 11/390 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||||||| ||| ||||| | |||||||||||| ||||| | || Sbjct 920322 TCAAAGAAGTTCGTTTTGCCCTGCAGCGAGATCATCTCCATGAAGTCAAAGGGCTGAGTC 920381 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||||| | ||| || | || | | ||||| || || ||||| | Sbjct 920382 GCGTTGTAGTGCTTCTCCTCGCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCAATG 920441 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||||||| || | ||||||||||||| || |||| || || |||||| Sbjct 920442 TACTGCGCCATCAGCTCGGCATTCATGCCAATCAGCCGCACCGGAAGCGCGTCGCAGATG 920501 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || |||| || || || ||| | | || || ||| | | | | ||| Sbjct 920502 AACTCGCGTTCGATGTTCACCGCATCCACAATGATCTCCAGCACACGCTCGCGCGGCAGT 920561 Query 251803 TTGTTCTCCAGCTTTGA---GTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 |||| || | | || |||||| || | ||| || | || ||| || ||||||| Sbjct 920562 TTGTGCTTGATGTGCGAGTTGTACAGCAGACACGCGAAGTCCGT--GTGTAGGCCCTCGT 920619 Query 251858 CGCGACTGATGAACTCGTTGGACAGACC--CAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 |||| ||||| ||||||| | || | || || ||||||| || || ||| | || Sbjct 920620 CGCGCGAGATGAGCTCGTTG--CTGAACGTCAACCCCGGCATCAGACCGCGCTTCTTCAG 920677 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAA 251945 |||||| | ||||| |||||||| || || Sbjct 920678 CCAGAACAGCGCGCAGAAGGATCCGGAAAA 920707 >seq17 Length=659812 Score = 123 bits (136), Expect = 5e-23 Identities = 265/390 (68%), Gaps = 11/390 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||||||| ||| ||||| | |||||||||||| ||||| | || Sbjct 494699 TCAAAGAAGTTCGTTTTGCCCTGCAGCGAGATCATCTCCATGAAGTCAAAGGGCTGAGTC 494758 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||||| | ||| || | || | | ||||| || || ||||| | Sbjct 494759 GCGTTGTAGTGCTTCTCCTCGCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCAATG 494818 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||||||| || | ||||||||||||| || |||| || || |||||| Sbjct 494819 TACTGCGCCATCAGCTCGGCATTCATGCCAATCAGCCGCATCGGAAGCGCGTCGCAGATG 494878 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || |||| || || || ||| | | || || ||| | | | | ||| Sbjct 494879 AACTCGCGTTCGATGTTCACCGCATCCACAATGATCTCCAGCACGCGCTCGCGCGGCAGT 494938 Query 251803 TTGTTCTCCAGCTTTGA---GTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 |||| || | | || |||||| || | ||| || | || ||| || ||||||| Sbjct 494939 TTGTGCTTGATGTGCGAGTTGTACAGCAGACACGCGAAGTCCGT--GTGTAGGCCCTCGT 494996 Query 251858 CGCGACTGATGAACTCGTTGGACAGACC--CAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 |||| ||||| ||||||| | || | || || ||||||| || || ||| | || Sbjct 494997 CGCGCGAGATGAGCTCGTTG--CTGAACGTCAACCCCGGCATCAGACCGCGCTTCTTCAG 495054 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAA 251945 |||||| | ||||| |||||||| || || Sbjct 495055 CCAGAACAGCGCGCAGAAGGATCCGGAAAA 495084 >seq23 Length=1180511 Score = 102 bits (112), Expect = 2e-16 Identities = 210/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577 ||||| | |||||||||||||| || ||||| ||| ||||| ||| || Sbjct 924538 GACTTTGTGGACAAGGAGCTCATCCTCTTCTCCATCGCTGACTGCGAGCGCAGTATCCCG 924597 Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637 || | | | || ||| ||||||| || || ||||||||||| || |||||||| Sbjct 924598 AGTGCGATTGACGGCTTCAAGCCCGGCCAACGCAAGATCCTCTTCTCCTGCTTCAAGCGT 924657 Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697 ||| |||| | || ||||| | ||| || | || || || || || || | | Sbjct 924658 AACTTGGTGAACTCTATCAAGGTGGTGCAGCTTGCCGGCTACGTCTCGGAGCACTCCGCC 924717 Query 218698 TACCATCACGGTGAGCA---GAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTAT 218754 ||||||||||| ||||| | | ||||| | || || || ||||| ||||||| | Sbjct 924718 TACCATCACGGCGAGCAGTCGCTTGTGCAG---ACGATCGTCGGAATGGCGCAGGACTTT 924774 Query 218755 GTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTG 218814 ||||| || |||||| | |||||| | |||||||||| ||| | || || Sbjct 924775 GTGGGTAGCAACAACGTTCCGCTGCTGCGCAAGGACGGTCAGTTCGGTACGCGGCTGCAC 924834 Query 218815 GGTGGAAAGGA 218825 ||||| ||||| Sbjct 924835 GGTGGCAAGGA 924845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836312741117