Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq17 107 4e-18 seq22 102 2e-16 >seq17 Length=659812 Score = 107 bits (118), Expect = 4e-18 Identities = 265/394 (67%), Gaps = 11/394 (3%) Strand=Plus/Minus Query 243334 TTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCT- 243392 |||||||| |||||||| | || |||||| ||| ||| ||||||| || | Sbjct 495084 TTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGGTTG 495025 Query 243393 -CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAG 243450 || || | |||||| ||||| |||||||||||||| ||| | |||| ||| Sbjct 495024 ACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCGCGTGT- 494968 Query 243451 CTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATC 243507 || |||| || | || || |||| || || ||| || | ||||| Sbjct 494967 CTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGCGTGCTGGAGATCATT 494908 Query 243508 ACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCC-ATGCCGGCTTAT 243566 || || || | | |||| || ||||| |||||||| |||| |||| |||| || Sbjct 494907 GTGGATGCGGTGAACATCGAACGCGAGTTCATCTGCGACGCGCTTCCGATGC-GGCTGAT 494849 Query 243567 TGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCAT 243626 ||||||||| | || || |||| |||||||| || ||||| || ||||| | | | Sbjct 494848 TGGCATGAATGCCGAGCTGATGGCGCAGTACATTGAGTTCGTCGCGGACCGGCTGCTTGT 494789 Query 243627 CGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCAT 243686 |||| || | ||||| |||||| | | | ||||||| ||| |||||| | || Sbjct 494788 GTCGCTGGGCGAGGAGAAGCACTACAACGCGACTCAGCCCTTTGACTTCATGGAGATGAT 494729 Query 243687 TTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAG 243720 ||||| || || ||||| |||||||| || ||| Sbjct 494728 CTCGCTGCAGGGCAAAACGAACTTCTTTGAGAAG 494695 >seq22 Length=1192232 Score = 102 bits (112), Expect = 2e-16 Identities = 259/389 (67%), Gaps = 9/389 (2%) Strand=Plus/Minus Query 243334 TTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCT- 243392 |||||||| |||||||| | || |||||| ||| ||| ||||||| || | Sbjct 920707 TTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGGTTG 920648 Query 243393 -CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAG 243450 || || | |||||| ||||| |||||||||||||| ||| | |||| ||| Sbjct 920647 ACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCGCGTGT- 920591 Query 243451 CTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATC 243507 || |||| || | || || |||| || || ||| || | ||||| Sbjct 920590 CTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGTGTGCTGGAGATCATT 920531 Query 243508 ACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATT 243567 || || || | | |||| || ||||| |||||||| |||| ||||| ||| Sbjct 920530 GTGGATGCGGTGAACATCGAACGCGAGTTCATCTGCGACGCGCTTCCGGTGCGGCTGATT 920471 Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 |||||||| | || || |||| |||||||| || ||||| || ||||| | | | Sbjct 920470 GGCATGAATGCCGAGCTGATGGCGCAGTACATTGAGTTCGTCGCGGACCGGCTGCTTGTG 920411 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 |||| || | ||||| |||||| | | | ||||||| ||| |||||| | || Sbjct 920410 TCGCTGGGCGAGGAGAAGCACTACAACGCGACTCAGCCCTTTGACTTCATGGAGATGATC 920351 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 ||||| || || ||||| |||||||| || Sbjct 920350 TCGCTGCAGGGCAAAACGAACTTCTTTGA 920322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879477165950