Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq23 141 1e-28 >seq23 Length=1180511 Score = 141 bits (156), Expect = 1e-28 Identities = 558/860 (65%), Gaps = 27/860 (3%) Strand=Plus/Minus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || || ||||| || || || || || || | ||||| ||| |||||||| | | Sbjct 328032 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 327973 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 ||||| || |||| || || | ||| || || || | |||||| || |||||||| || Sbjct 327972 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 327913 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || || ||||||||||| || ||| | ||| |||||||| | || |||| || || Sbjct 327912 TTGCATGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 327853 Query 114644 GCCTTCCAGACATCG-GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 || ||| || || ||| |||| | || | | || || ||| ||||||| Sbjct 327852 GCAAACCACACCTCCTGCGCCTGGATC-GTCTTGACACCGCGTCCTTCCGCCTCGTAGCG 327794 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGC---CTCTGAGAGCCCTGGTGCCTTATC 114759 |||||| || ||| | || || | ||| | ||||| |||| || | | | Sbjct 327793 CTCGTAGAGCCGCTCGAACGCCTCGCC-ATGGCAGTCGCTGAG-GCCCGGGCACGTGTTA 327736 Query 114760 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGAT 114819 || | | || | ||| | || | | |||||||||||||| | ||| ||||| Sbjct 327735 GGGTCC-ATCAGCGTCCACCGCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGAT 327677 Query 114820 CCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC--CCTGA-TTGAGACG 114876 ||| | || ||||||| || || ||| ||| | ||||| |||| ||| | Sbjct 327676 CCACAACGCGTAGAAGAGGTCACGG--GCGCGCTGGT-CATCCTTTCCTGTGTTGCGCTT 327620 Query 114877 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 114936 || | || || | | || ||| || ||||| || || || || || |||| | || Sbjct 327619 CAGCAACAGGAAACCAAAGACATCGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGCC 327560 Query 114937 CTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCAT 114993 ||| || || || |||||| ||| || | || ||| || || ||||| ||||| Sbjct 327559 CTTGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCAT 327500 Query 114994 TGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTG 115051 ||| | || || | || ||| || || || ||| || || | || | | Sbjct 327499 TGGTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGCAATGT-AG-CTGCCGGCGGCGCGG 327442 Query 115052 ACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 115111 | | || | |||| ||||||||| || ||| ||| ||| ||||||||| | Sbjct 327441 ATGTTGTGCACATGCAGACCAATACCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTC 327382 Query 115112 AGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA- 115170 || | ||||||| |||||||| ||| |||| || | |||||||| ||| Sbjct 327381 AGCGTATCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGGAAGCA---CGAG 327325 Query 115171 --CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATA 115228 |||||| ||| | || || |||||||||||||||||||| || |||||| |||| | Sbjct 327324 CTCATTTGCGGCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTAGCGTGGGTGAAAAAG 327265 Query 115229 CCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 115288 || |||||| || ||| ||||| ||| | | ||| ||||| || || Sbjct 327264 CCCATCGACATCAGATTGTACGTCTCACGCACGTTGTTGAGATCTCTGCCGTGGATGCCA 327205 Query 115289 ATCGAGACCCGCATAAACAT 115308 | | ||| ||||||||||| Sbjct 327204 AGGGCGACACGCATAAACAT 327185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353323723960