Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq23 192 6e-44 >seq23 Length=1180511 Score = 192 bits (212), Expect = 6e-44 Identities = 498/754 (66%), Gaps = 14/754 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || || || ||||| |||||||| || |||||| ||| || ||| ||||| |||||| Sbjct 327278 GCTACTCCAACCCTCTTCAACGCTGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTG 327337 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || || |||| |||| |||| ||| || | ||| | || ||||| || || Sbjct 327338 GTGGCGTCGAAGGACGACAGCATCGACGGCATCTACGATACGCTGAAGGAGTGCGCCGTG 327397 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || || || | ||| ||| || | || ||| || | Sbjct 327398 ATCAGCAAGGCGGCCGGCGGTATTGGTCTGCATGTGCACAACATCCGCGCCGCCGGCAGC 327457 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| || ||||| ||||| || ||||| ||||| || ||||| || ||||||||| Sbjct 327458 TACATTGCTGGAACCAACGGCACGTCGAACGGACTCGTACCAATGCTGCGCGTCTTCAAC 327517 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| |||||||| || || | | | ||||| | ||||| |||||| Sbjct 327518 AACACTGCCCGCTACGTAGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTAT 327577 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC-GGCAA 94250 |||||||||||||| || || || | |||| | ||| | | | ||| || || Sbjct 327578 CTCGAGCCCTGGCATGCCGATGTCTTTGGTTTCCTGTTGCTG-AAGCGCAACACAGGAAA 327636 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 ||| || | ||| | |||||||||||||| | ||| | || ||| | || ||||| Sbjct 327637 GGATGACCAGCGCGCCCGTGACCTCTTCTACGCGTTGTGGATCCCGGACTTGTTCATGAA 327696 Query 94311 ACGCGTCGAGAAAAACTCCG----CCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 || ||| |||| | | |||| || | || || || || || | Sbjct 327697 GCGTGTC----AAAAGTGAGGGGCGGTGGACGCTGATGGACCCTAACACGTGCCCGGGCC 327752 Query 94367 TGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCA 94426 | |||| ||| | || || | || | || ||||| || | || Sbjct 327753 TCAGCGACTGCCATGGCGAGGCGTTCGAGCGGCTCTACGAGCGCTACGAGGCGGAAGG-- 327810 Query 94427 AGGCCAGG--AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGT 94484 | || | ||| || | || | || ||||| | ||| |||| ||| | Sbjct 327811 ACGCGGTGTCAAGACGATCCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCTCAGAT 327870 Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCA 94544 |||||||| ||| | |||| ||| |||||| | |||| |||||| |||||| | Sbjct 327871 CGAGACGGGCGGGCCGTTCATCCTGTACAAGGATGCATGCAACAGCAAGTCAAACCAGAA 327930 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | |||| ||| ||||||| ||||||| |||||||| || ||||||||||| || || || Sbjct 327931 GAACCTTGGGACGATCAAGTGCTCGAACCTGTGCACTGAAATTGTCGAGTACACGTCGCC 327990 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 ||| |||| || || || ||||| | ||||||| Sbjct 327991 GGAGGAGACGGCCGTATGCAACCTCGCCTCCATC 328024 Score = 132 bits (146), Expect = 5e-26 Identities = 224/319 (70%), Gaps = 18/319 (6%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| ||| |||||||||| || || ||||| ||||||| || ||||||||| Sbjct 328469 AACTCACTGCTGGTGTCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGGCAACAAC 328528 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||||||||||||||| || | ||| | | || ||||| ||| || ||| Sbjct 328529 GAGTGTTTCGAACCCTTCACCTCGAATATATACGTCCGCCGTGTGCTGAGCGGCGAGTTC 328588 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGA-CAA 95267 || || | |||||| ||||| | |||||| | | | || ||||| ||| ||| Sbjct 328589 CCTGTGGTGAACAAGTACCTCGTCATGGACCTCATCGCGCGTGGCCTGTGGAATGAGCAA 328648 Query 95268 --GGTCAA--GAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACAT--CCCGCAAAT 95321 | ||| || || || || ||| || || ||| ||||| | || || Sbjct 328649 ATGCGCAACGAAATCATCTCTTA-----CAATGGTTCGATCCTCAACATTGACGGC--AT 328701 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACT 95381 || || ||| | |||| ||| ||| ||||||||||||||||||||||||| | | | Sbjct 328702 CCCAGATGACCTAAAGGAGCTTTACCGGACCGTGTGGGAGATCCCGCAGCGCAAGTTGAT 328761 Query 95382 CGAC----CACGCGGCCGC 95396 |||| |||||| |||| Sbjct 328762 CGACATGGCACGCGACCGC 328780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722971190520