Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq23 107 2e-18 >seq23 Length=1180511 Score = 107 bits (118), Expect = 2e-18 Identities = 376/584 (64%), Gaps = 5/584 (1%) Strand=Plus/Plus Query 122915 TCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGAC 122974 ||| || ||| | ||||| ||||| | ||| | ||||| | || || | |||| | Sbjct 327178 TCAGCAGATGTTTATGCGTGTCGCCCTTGGCATCCACGGCAGAGATCTCAACAACGTGCG 327237 Query 122975 CGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGC 123034 || || ||| || ||||||| |||||||| ||||| | ||| || | ||| Sbjct 327238 TGAGACGTACAATCTGATGTCGATGGGCTTTTTCACCCACGCTACTCCAACCCTCTTCAA 327297 Query 123035 CGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAG 123094 ||| ||||| | ||| || || ||||| || || | | | | || ||||| Sbjct 327298 CGCTGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGACGACAG 327357 Query 123095 CATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154 |||| ||| ||||| || || || || ||||| |||| ||| | |||||| Sbjct 327358 CATCGACGGCATCTACGATACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCGGCCGGCGG 327417 Query 123155 CATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGG 123214 || || || | |||||| || | | | | ||| ||| ||| | ||| |||| Sbjct 327418 TATTGGTCTGCATGTGCACAACATCCGCGCCGCCGGCAGCTACATTGCTGGAACCAACGG 327477 Query 123215 AATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274 | | ||| |||| | | |||||||| || | ||| ||| | | || |||| || Sbjct 327478 CACGTCGAACGGACTCGTACCAATGCTGCGCGTCTTCAACAACACTGCCCGCTACGTAGA 327537 Query 123275 CCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331 |||||||||| || ||||| ||||| | || ||||||| || || ||||| | || Sbjct 327538 CCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCTCGAGCCCTGGCATGCCGA 327597 Query 123332 TGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGA 123391 ||| | | ||| | | || ||||||| || ||| || || ||||| || Sbjct 327598 TGTCTTTGGTTTCCTGTTGCTGAAGCGCAACACAGGAAAGGATGACCAGCGCGCCCGTGA 327657 Query 123392 TTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGT 123451 | || ||||| || ||| | || || ||||| ||| || || ||| || || Sbjct 327658 CCTCTTCTACGCGTTGTGGATCCCGGACTTGTTCATGAAGCGTGTCAAAAGTGAGGGGCG 327717 Query 123452 GTGGTCGCTCATGTGTCCCGATC-GGTGTCCCGGCTTGAGCGAC 123494 |||| |||| ||| | ||| | | ||| || ||| | |||||| Sbjct 327718 GTGGACGCTGATG-GACCCTAACACGTGCCCGGGCCTCAGCGAC 327760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002990948520