Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq23 149 8e-31 >seq23 Length=1180511 Score = 149 bits (164), Expect = 8e-31 Identities = 526/805 (65%), Gaps = 25/805 (3%) Strand=Plus/Minus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || || ||||| || || || || || || | ||||| ||| |||||||| | | Sbjct 328032 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 327973 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 ||||| || |||| || || | ||| || || || | |||||| || |||||||| || Sbjct 327972 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 327913 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||||| || || | ||| |||||||| | || |||| || || Sbjct 327912 TTGCATGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 327853 Query 116605 GCCTTCCATACATCG-GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || ||| || || ||| |||| | || | | || || ||| ||||||| Sbjct 327852 GCAAACCACACCTCCTGCGCCTGGATC-GTCTTGACACCGCGTCCTTCCGCCTCGTAGCG 327794 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCA--CAGCCTCTGAGAGCCCTGGTGCCTTATCT 116721 |||||| ||| ||| | || || ||| | ||||| |||| || | | | Sbjct 327793 CTCGTAGAGCCGCTCGAACGCCTCGCCATGGCAGTCGCTGAG-GCCCGGGCACGTGTTAG 327735 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || | | || | ||| | || | | || ||||||||||| | ||| |||||| Sbjct 327734 GGTCC-ATCAGCGTCCACCGCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGATC 327676 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC--CCTGA-TTGAGACGC 116838 || | ||| ||||||| || || ||| ||| | ||||| |||| ||| | | Sbjct 327675 CACAACGCGTAGAAGAGGTCACGG--GCGCGCTGGT-CATCCTTTCCTGTGTTGCGCTTC 327619 Query 116839 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 116898 | | || || | | || ||| || ||||| || || || || || |||| | ||| Sbjct 327618 AGCAACAGGAAACCAAAGACATCGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGCCC 327559 Query 116899 TTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955 ||||| || || |||||| ||| || | || || ||| || ||||| |||||| Sbjct 327558 TTGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATT 327499 Query 116956 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTT--GTTGGCTCTGA 117013 || | || || | || ||| || || || ||| || || | ||| | || Sbjct 327498 GGTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGCAATGT-AG-CTGCCGGCGGCGCGGA 327441 Query 117014 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073 | ||| | |||| ||||||||| || ||| ||| ||| ||||||||| | | Sbjct 327440 TGTTGTGCACATGCAGACCAATACCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTCA 327381 Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA-- 117131 | | ||||||| || ||||| ||| |||| || | |||||||| ||| Sbjct 327380 GCGTATCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGGAAGCA---CGAGC 327324 Query 117132 -CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 117190 |||||| ||| | || || |||||||||||||||||||| || |||||| |||| | | Sbjct 327323 TCATTTGCGGCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTAGCGTGGGTGAAAAAGC 327264 Query 117191 CTTGGGACATCTTATCGTAGGTCTC 117215 | |||||| || ||| ||||| Sbjct 327263 CCATCGACATCAGATTGTACGTCTC 327239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506916252920